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Protein Overview: ORC1B_ARATH

General Information:
Name(s) found: ORC1B_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Origin of replication complex subunit 1B OS=Arabidopsis thaliana GN=ORC1B PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 813 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    origin recognition complex [ISS]
    Biological Process: DNA replication [ISS]
    double fertilization forming a zygote and endosperm [IMP]
    regulation of transcription [IMP]
    Molecular Function: DNA binding [ISS]
    double-stranded methylated DNA binding [IDA]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTPRAKTF KSPTKTPSNI YRKSYLSPSS TSHTPQTPET HTPLRRSARH VSRKIDLGND  60
   61 PIDAPGNDPI EGMNLIRKRE RAPRKPTTDV VPSKSKKTET PKKKKKIDSF TPVSPIRSET 120
  121 IKKTKKKKRV YYNKVEFDET EFEIGDDVYV KRREDSNSDE EEDPEIEDCQ ICFKSDTNIM 180
  181 IECDDCLGGF HLKCLKPPLK EVPEGDWICQ FCEVKKSGQS QTLDLPKPPE GKKLARTMRE 240
  241 KLLSGDLWAA RIDKLWKEVD DGVYWIRARW YMIPEETVSG RQPHNLKREL YLTNDFADIE 300
  301 MECILRHCSV KCPKEFSKAS NDGDDVFLCE YEYDVHWRSF KRLAELADGD SDSDQEWNGR 360
  361 KEEEVDDSDE EMELDDEVLK SKRGGLTSAR GGANSRKGRF FGVEKVGMKL IPEHVRCHKQ 420
  421 SELEKAKATL LLATRPKSLP CRSKEMEEIT SFIKGSISDD QCLGRCMYIH GVPGTGKTIS 480
  481 VLSVMKNLKA EVEEGSVSPY CFVEINGLKL ASPENIYSVI YEALSGHRVG WKKALQCLNE 540
  541 RFAEGKRIGK EDEKPCILLI DELDLLVTRN QSVLYNILDW PTKPNSKLVV LGIANTMDLP 600
  601 EKLLPRISSR MGIQRLCFGP YNHTQLQEII STRLNGIDAF EKTAIEFASR KVAAISGDAR 660
  661 RALEICRRAA EVADHRLNTN KSAKNQLVIM ADVEAAIQEM FQAPHIQVMK SVSKLSKIFL 720
  721 TAMVHELYKT GMAETTFDRV ATTVSSICLT NGEAFPGWDI LLKIGCDLGE CRIILCEPGE 780
  781 KHRLQKLQLN FPSDDVAFAL KDNKDLPWLA NYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] deduced N/A No confident structure predictions are available.
    2 View Details [90..224] PSI-BLAST 9.69897 No description for 2ysmA was found.
    3 View Details [225..710] PSI-BLAST 36.69897 The crystal structure of murine p97/VCP at 3.6A
    4 View Details [711..813] PSI-BLAST 60.522879 EDTA treated


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle