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Protein Overview: gi|20465921, gi|...

General Information:
Name(s) found: gi|9280290 [NCBI NR]
gi|20465921 [NCBI NR]
gi|18176449 [NCBI NR]
gi|15912263 [NCBI NR]
gi|15231231 [NCBI NR]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • gi|9280290|dbj|BAB01745.1| BNH protein; pectinesterase-like protein; pollen-secific protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|20465921|gb|AAM20113.1| putative pollen-specific protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18176449|gb|AAL60046.1| putative pollen specific protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15912263|gb|AAL08265.1| AT3g13400/MRP15_3 [Arabidopsis thaliana] [NCBI NR]
  • gi|15231231|ref|NP_187948.1| sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 551 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: copper ion binding [IEA]
    oxidoreductase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGGRLLTVL VCLASTVALV SAGDPYFYYT WNVTYGTAAP LGIPQQVILI NGQFPGPNLN  60
   61 STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT SCPIPAGTNF TYHFQPKDQI 120
  121 GSYFYYPSTA LHRFAGGFGG LRVNSRLLIP VPYADPEDDR TILINDWYAK SHTALKNFLD 180
  181 SGRTLGSPDG VLINGKSGKL GGNNAPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL 240
  241 VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQVAKNYYMV ASTRFLKKEV STVGVMSYEG 300
  301 SNVQASSDIP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK 360
  361 NLVNGKVRFG FNGVSHVDTE TPLKLAEYFG MSEKVFKYNV IKDEPAAKIT TLTVEPNVLN 420
  421 ITFRTFVEVV FENHEKSMQS FHLDGYSFFA VASEPGRWTP EKRNNYNLLD AVSRHTVQVY 480
  481 PKSWSAILLT FDNAGMWNIR SENWERRYLG QQLYVSVLSP EKSLRDEYNI PLNTNLCGIV 540
  541 KGLPLPTPYT I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..551] PSI-BLAST 102.0 Ascorbate oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  3.01218347550477 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.94535655802043 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.6745480751389 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.65536020269373 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.17429358667283 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.63942316748862 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  1.51790376716885 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  1.46068051535503 bayes_pls_golite062009
  • transporter activity
    		•  1.20799429432885 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.14867039407339 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.09624639459552 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.85648428256869 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.761084719356529 bayes_pls_golite062009
  • copper ion binding
    		•  0.73440414441333 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions, oxygen as acceptor
    		•  0.575651787344859 bayes_pls_golite062009
  • ferroxidase activity
    		•  0.575651787344859 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions
    		•  0.17115124627182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle