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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20465921, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGGRLLTVL VCLASTVALV SAGDPYFYYT WNVTYGTAAP LGIPQQVILI NGQFPGPNLN  60
   61 STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT SCPIPAGTNF TYHFQPKDQI 120
  121 GSYFYYPSTA LHRFAGGFGG LRVNSRLLIP VPYADPEDDR TILINDWYAK SHTALKNFLD 180
  181 SGRTLGSPDG VLINGKSGKL GGNNAPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL 240
  241 VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQVAKNYYMV ASTRFLKKEV STVGVMSYEG 300
  301 SNVQASSDIP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK 360
  361 NLVNGKVRFG FNGVSHVDTE TPLKLAEYFG MSEKVFKYNV IKDEPAAKIT TLTVEPNVLN 420
  421 ITFRTFVEVV FENHEKSMQS FHLDGYSFFA VASEPGRWTP EKRNNYNLLD AVSRHTVQVY 480
  481 PKSWSAILLT FDNAGMWNIR SENWERRYLG QQLYVSVLSP EKSLRDEYNI PLNTNLCGIV 540
  541 KGLPLPTPYT I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle