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Protein Overview: RPN13_ARATH

General Information:
Name(s) found: RPN13_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • 26S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana GN=RPN13 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    cytoplasm [IEA]
    integral to membrane [ISS]
    Biological Process: cell adhesion [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSEAFPVM QEIMLEFRAG KMSLQGTRVV PDARKGLVRI ARGDEGLIHF QWLDRNQNTV  60
   61 EDDQIVFPDE ALFEKVNQSS DRVYILKFNS DDRKLFFWMQ EPRAEGDAEL CSSVNQYLNQ 120
  121 PLEFPGEEGL AAAITEELED MAEDNTSSRA GNLVVPNLSS EVSDVTSSSG PVKLADLQRI 180
  181 LNNLSGGPVG IAGDQDEGLA LGDILKPELI MPLLEALPVQ ERLSSHLPEG HSRAEDILEL 240
  241 LQSPPFRQQV DAFTYVLRTG QIDLTQFGID PSKYKFTVDS FLEALEDSVS TQSRDAMDES 300
  301

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] MSA 12.040983 View MSA. Confident ab initio structure predictions are available.
    2 View Details [173..300] MSA 4.030997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle