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Protein Overview: gi|7485468, gi|1...

General Information:
Name(s) found: gi|7485468 [NCBI NR]
gi|3337367 [NCBI NR]
gi|15226290 [NCBI NR]
Description(s) found:
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  • pir||T02324 hypothetical protein At2g34360 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|3337367|gb|AAC27412.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15226290|ref|NP_180983.1| MATE efflux family protein [Arabidopsis thaliana] [NCBI NR]
  • (O80785) At2g34360 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein [Arabidopsis thaliana]gi|7485468|pir||T02324 hypothetical protein At2g34360 [imported] - Arabidopsis thalianagi|15226290|ref|NP_180983.1| MATE efflux family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MATE efflux family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | MATE efflux family protein | chr2:14514373-14517138 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • antiporter/ drug transporter/ transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    Biological Process: drug transmembrane transport [IEA]
    Molecular Function: antiporter activity [IEA][ISS]
    transporter activity [ISS]
    drug transmembrane transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREEREDMLS WPLIGEKEKR SRFVKEEVEK QLLLSGPLIA VSLLQFCLQI ISVMFVGHLG  60
   61 SLPLSAASIA TSFASVTGFT FLMGTASAMD TVCGQSYGAK MYGMLGIQMQ RAMLVLTLLS 120
  121 VPLSIVWANT EHFLVFFGQD KSIAHLSGSY ARFMIPSIFA YGLLQCLNRF LQAQNNVIPV 180
  181 VICSGVTTSL HVIICWVLVL KSGLGFRGAA VANAISYWLN VILLSCYVKF SPSCSLTWTG 240
  241 FSKEARRDII PFMKLVIPSA FMVCSLEMWS FELLVLSSGL LPNPVLETSC PRTVWMIPFG 300
  301 LSGAASTRVS NELGSGNPKG AKLAVRVVLS FSIVESILVG TVLILIRKIW GFAYSSDPEV 360
  361 VSHVASMLPI LALGHSLDSF QTVLSGVARG CGWQKIGAFV NLGSYYLVGV PFGLLLGFHF 420
  421 HVGGRGLWLG IICALIVQGV CLSLITFFTN WDEEVKPSPC LVYFYF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..230] Pfam 47.113509 No description for PF01554.9 was found. No confident structure predictions are available.
    2 View Details [231..466] Pfam 25.443697 No description for PF01554.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle