YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: AAE20_ARATH

General Information:
Name(s) found: AAE20_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • Benzoate--CoA ligase, peroxisomal OS=Arabidopsis thaliana GN=AAE20 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 580 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [ISS]
    Biological Process: glucosinolate biosynthetic process [IMP]
    Molecular Function: benzoate-CoA ligase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDLALCEAN NVPLTPMTFL KRASECYPNR TSIIYGKTRF TWPQTYDRCC RLAASLISLN  60
   61 ISKNDVVSVM APNTPALYEM HFAVPMAGAV LNPINTRLDA TSIAAILRHA KPKILFLDRS 120
  121 FEALARESLH LLSSEDSNLN LPVIFIHEND FPKRASFEEL DYECLIQRGE PTPSMVARMF 180
  181 RIQDEHDPIS LNYTSGTTAD PKGVVISHRG AYLCTLSAII GWEMGTCPVY LWTLPMFHCN 240
  241 GWTFTWGTAA RGGTSVCMRH VTAPEIYKNI EMHNVTHMCC VPTVFNILLK GNSLDLSPRS 300
  301 GPVHVLTGGS PPPAALVKKV QRLGFQVMHA YGQTEATGPI LFCEWQDEWN RLPENQQMEL 360
  361 KARQGISILG LADVDVKNKE TQKSAPRDGK TMGEILIKGS SIMKGYLKNP KATFEAFKHG 420
  421 WLNTGDVGVI HPDGHVEIKD RSKDIIISGG ENISSVEVEN VLYKYPKVLE TAVVAMPHPT 480
  481 WGETPCAFVV LEKSETTIKE DRVDKFQTRE RNLIEYCREN LPHFMCPRKV VFLEELPKNG 540
  541 NGKILKPKLR DIAKGLVVED EINVIAKEVK RPVGHFISRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..580] PSI-BLAST 102.0 Crystal structure of tt0168 from Thermus thermophilus HB8

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-sulfur bonds
    		•  5.10123876514454 bayes_pls_golite062009
  • fatty acid ligase activity
    		•  4.83067429373059 bayes_pls_golite062009
  • long-chain fatty acid-CoA ligase activity
    		•  4.72692389032116 bayes_pls_golite062009
  • acetate-CoA ligase activity
    		•  4.48129067128523 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  4.28278725989432 bayes_pls_golite062009
  • CoA-ligase activity
    		•  4.12850865352867 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)
    		•  2.74744781333102 bayes_pls_golite062009
  • Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
    		•  2.74744781333102 bayes_pls_golite062009
  • luciferin monooxygenase activity
    		•  2.67396462766343 bayes_pls_golite062009
  • ligase activity
    		•  2.49556073715112 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.31193176808353 bayes_pls_golite062009
  • catalytic activity
    		•  1.83545185797733 bayes_pls_golite062009
  • binding
    		•  1.5312519256537 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.2638869228049 bayes_pls_golite062009
  • acetoacetate-CoA ligase activity
    		•  1.03788694975627 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.464663038956639 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle