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Protein Overview: IQD1_ARATH

General Information:
Name(s) found: IQD1_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 454 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: glucosinolate biosynthetic process [IMP]
    defense response [IMP]
    Molecular Function: calmodulin binding [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE  60
   61 QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR FAGKSKEEAA AILIQSTFRG 120
  121 HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR 180
  181 HKQLLQKHAK ELGGLKNGGN WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK 240
  241 SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG 300
  301 ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI 360
  361 ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR VAVTTSTTEE SSILPEKAPA 420
  421 KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..307] PSI-BLAST 38.69897 No description for 2dfsA was found.
    2 View Details [308..454] FFAS03 1.56 No description for 2j63A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle