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View Structure Prediction Details

Protein: IQD1_ARATH
Organism: Arabidopsis thaliana
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IQD1_ARATH.

Description E-value Query
Range
Subject
Range
gi|145357576, gi... - gi|238481199|ref|NP_001154693.1| iqd2 (IQ-domain 2); calmodulin binding [Arabidopsis thaliana], gi|2...
202.0 [0..1] [447..1]

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Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE  60
   61 QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR FAGKSKEEAA AILIQSTFRG 120
  121 HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR 180
  181 HKQLLQKHAK ELGGLKNGGN WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK 240
  241 SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG 300
  301 ETAKSSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.69897
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [308-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNKLNSSTKP NTPSASSTAT RNPRKKRPIP SSIKSKSSDD EAKSSERNRR PSIARPSVSD  60
   61 DETLSSSTAR RSSNLIPTTK SARGKPKSQT SSRVAVTTST TEESSILPEK APAKKRLSTS 120
  121 ASPAPKPRRS SAPPKVEKGV LKAERTP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.56
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle