YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15229664, gi|...

General Information:
Name(s) found: gi|6522927 [NCBI NR]
gi|41619290 [NCBI NR]
gi|21700827 [NCBI NR]
gi|15983428 [NCBI NR]
gi|15229664 [NCBI NR]
gi|11273949 [NCBI NR]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • gi|6522927|emb|CAB62114.1| R2R3-MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|41619290|gb|AAS10068.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|21700827|gb|AAM70537.1| AT3g50060/F3A4_140 [Arabidopsis thaliana] [NCBI NR]
  • gi|15983428|gb|AAL11582.1|AF424588_1 AT3g50060/F3A4_140 [Arabidopsis thaliana] [NCBI NR]
  • gi|15229664|ref|NP_190575.1| MYB77; DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||T45859 R2R3-MYB transcription factor - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 301 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    response to salicylic acid stimulus [IEP]
    response to chitin [IEP]
    response to ethylene stimulus [IEP]
    lateral root development [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP  60
   61 FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN STLKRKCSGG VAVTTVTETE 120
  121 EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS 180
  181 GGFTVVPQPL PVEMSSSSED PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE 240
  241 ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV 300
  301 E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] PSI-BLAST 41.221849 c-Myb, DNA-binding domain
    2 View Details [109..301] MSA 2.633993 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle