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Protein Overview: FAB1B_ARATH

General Information:
Name(s) found: FAB1B_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana GN=FAB1B PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1791 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: signal transduction [ISS]
    Molecular Function: zinc ion binding [ISS]
    1-phosphatidylinositol-4-phosphate 5-kinase activity [ISS]
    phosphoinositide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTRDSNNRT FSEIVGLIKS WLPWRSEPAT VSRDFWMPDQ SCRVCYECDC QFTLINRRHH  60
   61 CRHCGRVFCG KCTANSIPFA PSDLRTPRED WERIRVCNYC FRQWEQGDGG PHVSNITELS 120
  121 TSPSETSLLS SKTSTTANSS SFALGSMPGL IGLNQRVHHG SDVSLHGVSS METSVTKQGK 180
  181 ETSRRSSFIA TDVEDPSRFA LNSIRSDDEY DEYGAYQTDI ETSHSPRANE YYGPMEYNGM 240
  241 GIDDVPCKHL GGETADQKSL SGSPLIHQCL ESLIREGSEQ FQKKSEHDGR DECEASSPAD 300
  301 ISDDQVVEPV DFENNGLLWV PPEPENEEDE RESALFDEED NEGDASGEWG YLRPSTSFGS 360
  361 GEYRGEDRTT EEHKKAMKNV VDGHFRALLA QLLQVENISV SDEEGKESWL EIITSLSWEA 420
  421 ANLLKPDMSK SGGMDPGGYV KVKCLASGFR HDSMVVKGVV CKKNVVNRRM STKIEKARLL 480
  481 ILGGGLEYQR VSNQLSSFDT LLQQEKDHLK MAVAKIHAER PNILLVEKSV SRFAQEYLLA 540
  541 KDISLVLNIK RPLLDRIARC TGAQIIPSVD HLSSQKLGYC ENFRVDRYPE EHGSTGQVGK 600
  601 KVVKTLMYFE HCPKPLGFTI LLRGANEDEL KKVKHVVQYG VFAAYHLALE TSFLADEGAS 660
  661 PELPLNSPIT VALPDKSTSI ERSISTVPGF TVSTYEKSPT MLSCAEPQRA NSVPVSELLS 720
  721 TTTNLSIQKD IPPIPYGSGW QAREINPSFV FSRHNISLNL PDRVIESRNS DLSGRSVPVD 780
  781 TPADKSNPIV VADETTNNSL HLSGQGFVRK SSQIGTSIMV ENQDNGSELT IAQQQNNEKP 840
  841 KETQSQKEEF PPSPSDHQSI LVSLSSRSVW KGTVCERSHL FRIKYYGSFD KPLGRFLRDH 900
  901 LFDQSYRCRS CEMPSEAHVH CYTHRQGSLT ISVKKLQDYL LPGEKEGKIW MWHRCLRCPR 960
  961 LNGFPPATLR VVMSDAAWGL SFGKFLELSF SNHAAASRVA CCGHSLHRDC LRFYGFGNMV1020
 1021 ACFRYATIDV HSVYLPPSIL SFNYENQDWI QRETDEVIER AELLFSEVLN AISQIAEKGF1080
 1081 RRRIGELEEV LQKEKAEFEE NMQKILHREV NEGQPLVDIL ELYRIHRQLL FQSYMWDHRL1140
 1141 INASTLHKLE NSDDTKREEN EKPPLAKSQT LPEMNAGTNS LLTGSEVNLN PDGDSTGDTG1200
 1201 SLNNVQKEAD TNSDLYQEKD DGGEVSPSKT LPDTSYPLEN KVDVRRTQSD GQIVMKNLSA1260
 1261 TLDAAWIGER QTSVEIPTNN KVSLPPSTMS NSSTFPPISE GLMPIDLPEQ QNEFKVAYPV1320
 1321 SPALPSKNYE NSEDSVSWLS VPFLNFYRSI NKNFLLSSQK LDTFGEHSPI YISSFREAEL1380
 1381 QGGPRLLLPV GLNDIVVPVY DDEPTSMIAY ALMSPEYQRQ TSAEGESLVS YPSELNIPRP1440
 1441 VDDTIFDPSR SNGSVDESIL SISSSRSTSL LDPLSYTKAL HARVSYGEDG TLGKVKYTVT1500
 1501 CYYAKRFEAL RGICLPSELE YIRSLSRCKK WGAQGGKSNV FFAKTLDDRF IIKQVTKTEL1560
 1561 ESFIKFAPAY FKYLSESIST KSPTCLAKIL GIYQVATKQL KSGKETKMDV LIMENLLFGR1620
 1621 TVKRLYDLKG SSRARYNPDS SGSNKVLLDQ NLIEAMPTSP IFVGNKAKRL LERAVWNDTA1680
 1681 FLALGDVMDY SLLVGVDEEK NELVLGIIDF LRQYTWDKHL ESWVKFTGIL GGPKNEAPTV1740
 1741 ISPKQYKRRF RKAMTTYFLM VPDQWSPPNV VANNSKSDQP EETSQAGTQA E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] PSI-BLAST 22.39794 Eea1; Eea1 homodimerisation domain
    2 View Details [106..242] deduced N/A No confident structure predictions are available.
    3 View Details [243..793] PSI-BLAST 151.0 Crystal structure of the chaperonin from Thermococcus strain KS-1 (nucleotide-free form of single mutant)
    4 View Details [794..964] deduced N/A No confident structure predictions are available.
    5 View Details [965..1141] deduced N/A No confident structure predictions are available.
    6 View Details [1142..1203] deduced N/A No confident structure predictions are available.
    7 View Details [1204..1439] MSA 3.223996 View MSA. No confident structure predictions are available.
    8 View Details [1440..1687] PSI-BLAST 76.39794 Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
    9 View Details [1688..1791] FFAS03 3.14 No description for 2gk9A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8
    Term Confidence Notes
  • catalytic activity
    		•  1.3478684630282 bayes_pls_golite062009
    9 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle