| Protein: | FAB1B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1791 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAB1B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1368.0 | [0..5] | [1784..2] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MGTRDSNNRT FSEIVGLIKS WLPWRSEPAT VSRDFWMPDQ SCRVCYECDC QFTLINRRHH 60
61 CRHCGRVFCG KCTANSIPFA PSDLRTPRED WERIRVCNYC FRQWE
|
| Detection Method: |  |
| Confidence: | 22.39794 |
| Match: | 1jocA |
| Description: | Eea1; Eea1 homodimerisation domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [106-242] |
1 11 21 31 41 51
| | | | | |
1 QGDGGPHVSN ITELSTSPSE TSLLSSKTST TANSSSFALG SMPGLIGLNQ RVHHGSDVSL 60
61 HGVSSMETSV TKQGKETSRR SSFIATDVED PSRFALNSIR SDDEYDEYGA YQTDIETSHS 120
121 PRANEYYGPM EYNGMGI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [243-793] |
1 11 21 31 41 51
| | | | | |
1 DDVPCKHLGG ETADQKSLSG SPLIHQCLES LIREGSEQFQ KKSEHDGRDE CEASSPADIS 60
61 DDQVVEPVDF ENNGLLWVPP EPENEEDERE SALFDEEDNE GDASGEWGYL RPSTSFGSGE 120
121 YRGEDRTTEE HKKAMKNVVD GHFRALLAQL LQVENISVSD EEGKESWLEI ITSLSWEAAN 180
181 LLKPDMSKSG GMDPGGYVKV KCLASGFRHD SMVVKGVVCK KNVVNRRMST KIEKARLLIL 240
241 GGGLEYQRVS NQLSSFDTLL QQEKDHLKMA VAKIHAERPN ILLVEKSVSR FAQEYLLAKD 300
301 ISLVLNIKRP LLDRIARCTG AQIIPSVDHL SSQKLGYCEN FRVDRYPEEH GSTGQVGKKV 360
361 VKTLMYFEHC PKPLGFTILL RGANEDELKK VKHVVQYGVF AAYHLALETS FLADEGASPE 420
421 LPLNSPITVA LPDKSTSIER SISTVPGFTV STYEKSPTML SCAEPQRANS VPVSELLSTT 480
481 TNLSIQKDIP PIPYGSGWQA REINPSFVFS RHNISLNLPD RVIESRNSDL SGRSVPVDTP 540
541 ADKSNPIVVA D
|
| Detection Method: | |
| Confidence: | 151.0 |
| Match: | 1q3rA |
| Description: | Crystal structure of the chaperonin from Thermococcus strain KS-1 (nucleotide-free form of single mutant) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [794-964] |
1 11 21 31 41 51
| | | | | |
1 ETTNNSLHLS GQGFVRKSSQ IGTSIMVENQ DNGSELTIAQ QQNNEKPKET QSQKEEFPPS 60
61 PSDHQSILVS LSSRSVWKGT VCERSHLFRI KYYGSFDKPL GRFLRDHLFD QSYRCRSCEM 120
121 PSEAHVHCYT HRQGSLTISV KKLQDYLLPG EKEGKIWMWH RCLRCPRLNG F
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [965-1141] |
1 11 21 31 41 51
| | | | | |
1 PPATLRVVMS DAAWGLSFGK FLELSFSNHA AASRVACCGH SLHRDCLRFY GFGNMVACFR 60
61 YATIDVHSVY LPPSILSFNY ENQDWIQRET DEVIERAELL FSEVLNAISQ IAEKGFRRRI 120
121 GELEEVLQKE KAEFEENMQK ILHREVNEGQ PLVDILELYR IHRQLLFQSY MWDHRLI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1142-1203] |
1 11 21 31 41 51
| | | | | |
1 NASTLHKLEN SDDTKREENE KPPLAKSQTL PEMNAGTNSL LTGSEVNLNP DGDSTGDTGS 60
61 LN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1204-1439] |
1 11 21 31 41 51
| | | | | |
1 NVQKEADTNS DLYQEKDDGG EVSPSKTLPD TSYPLENKVD VRRTQSDGQI VMKNLSATLD 60
61 AAWIGERQTS VEIPTNNKVS LPPSTMSNSS TFPPISEGLM PIDLPEQQNE FKVAYPVSPA 120
121 LPSKNYENSE DSVSWLSVPF LNFYRSINKN FLLSSQKLDT FGEHSPIYIS SFREAELQGG 180
181 PRLLLPVGLN DIVVPVYDDE PTSMIAYALM SPEYQRQTSA EGESLVSYPS ELNIPR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1440-1687] |
1 11 21 31 41 51
| | | | | |
1 PVDDTIFDPS RSNGSVDESI LSISSSRSTS LLDPLSYTKA LHARVSYGED GTLGKVKYTV 60
61 TCYYAKRFEA LRGICLPSEL EYIRSLSRCK KWGAQGGKSN VFFAKTLDDR FIIKQVTKTE 120
121 LESFIKFAPA YFKYLSESIS TKSPTCLAKI LGIYQVATKQ LKSGKETKMD VLIMENLLFG 180
181 RTVKRLYDLK GSSRARYNPD SSGSNKVLLD QNLIEAMPTS PIFVGNKAKR LLERAVWNDT 240
241 AFLALGDV
|
| Detection Method: | |
| Confidence: | 76.39794 |
| Match: | 1bo1A |
| Description: | Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.3478684630282 | bayes_pls_golite062009 |
|
Region A: Residues: [1688-1791] |
1 11 21 31 41 51
| | | | | |
1 MDYSLLVGVD EEKNELVLGI IDFLRQYTWD KHLESWVKFT GILGGPKNEA PTVISPKQYK 60
61 RRFRKAMTTY FLMVPDQWSP PNVVANNSKS DQPEETSQAG TQAE
|
| Detection Method: | |
| Confidence: | 3.14 |
| Match: | 2gk9A |
| Description: | No description for 2gk9A was found. |
