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Protein Overview: DRE1F_ARATH

General Information:
Name(s) found: DRE1F_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana GN=DREB1F PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 209 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to salt stress [IGI]
    regulation of timing of transition from vegetative to reproductive phase [IMP]
    cell growth [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    sequence-specific DNA binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNDDIILAE MRPKKRAGRR VFKETRHPVY RGIRRRNGDK WVCEVREPTH QRRIWLGTYP  60
   61 TADMAARAHD VAVLALRGRS ACLNFADSAW RLPVPESNDP DVIRRVAAEA AEMFRPVDLE 120
  121 SGITVLPCAG DDVDLGFGSG SGSGSGSEER NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR 180
  181 SYMEDMTPTN VYTEEEMCYE DMSLWSYRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] PSI-BLAST 22.221849 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
    2 View Details [90..209] MSA 1.267995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle