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Protein Overview: DRE1F_ARATH

General Information:
Name(s) found: DRE1F_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9502389|gb|AAF88096.1|AC025417_24 T12C24.14 [Arabidopsis thaliana] [NCBI NR]
  • gi|48479384|gb|AAT44959.1| putative AP2/EREBP transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|47605747|sp|Q9LN86.1|DRE1F_ARATH RecName: Full=Dehydration-responsive element-binding protein 1F; Short=Protein DREB1F [NCBI NR]
  • pir||H86259 protein T12C24.14 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15222028|ref|NP_172721.1| DDF1 (DWARF AND DELAYED FLOWERING 1); DNA binding / sequence-specific DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|110736358|dbj|BAF00148.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana GN=DREB1F PE=2 SV=1 [Swiss-Prot]
  • (Q9LN86) Dehydration responsive element binding protein 1F (DREB1F protein) [Swiss-Prot]
  • (Q9LN86) T12C24.14 [athaliana3702.FASTAC.txt]
  • putative AP2/EREBP transcription factor [Arabidopsis thaliana]gi|47605747|sp|Q9LN86|DR1F_ARATH Dehydration responsive element binding protein 1F (DREB1F protein)gi|9502389|gb|AAF88096.1| T12C24.14 [Arabidopsis thaliana]gi|25350646|pir||H86259 protein T [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Dehydration-responsive element-binding protein 1F [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: DDF1 | DDF1 (DWARF AND DELAYED FLOWERING 1); DNA binding / transcription factor | chr1:4290203-4290832 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Dehydration-responsive element-binding protein 1F (DREB1F protein) [nr-271106-contam.fasta]
  • DDF1; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative AP2/EREBP transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • T12C24.14 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: DDF1 | Integrase-type DNA-binding superfamily protein | chr1:4290205-4290834 REVERSE LENGTH=209 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 209 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to salt stress [IGI]
    regulation of timing of transition from vegetative to reproductive phase [IMP]
    cell growth [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    sequence-specific DNA binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNDDIILAE MRPKKRAGRR VFKETRHPVY RGIRRRNGDK WVCEVREPTH QRRIWLGTYP  60
   61 TADMAARAHD VAVLALRGRS ACLNFADSAW RLPVPESNDP DVIRRVAAEA AEMFRPVDLE 120
  121 SGITVLPCAG DDVDLGFGSG SGSGSGSEER NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR 180
  181 SYMEDMTPTN VYTEEEMCYE DMSLWSYRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] PSI-BLAST 22.221849 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
    2 View Details [90..209] MSA 1.267995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle