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Protein Overview: SBIR1_ARATH

General Information:
Name(s) found: SBIR1_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 OS=Arabidopsis thaliana GN=SOBIR1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 641 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: positive regulation of defense response [IMP]
    transmembrane receptor protein tyrosine kinase signaling pathway [ISS]
    positive regulation of cell death [IMP]
    protein amino acid phosphorylation [ISS]
    negative regulation of floral organ abscission [IGI]
    Molecular Function: ATP binding [ISS]
    protein serine/threonine kinase activity [ISS]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPTGSANL FLRPLILAVL SFLLLSSFVS SVEWLDIDSS DLKALQVIET ELGVNSQRSS  60
   61 ASDVNPCGRR GVFCERRHSA TTGEYVLRVT RLVYRSRSLT GTISPVIGML SELKELTLSN 120
  121 NQLVNAVPVD ILSCKQLEVL DLRKNRFSGQ IPGNFSSLSR LRILDLSSNK LSGNLNFLKN 180
  181 LRNLENLSVA NNLFSGKIPE QIVSFHNLRF FDFSGNRYLE GPAPVMSSIK LQTSPHQTRH 240
  241 ILAETPTSSP TNKPNNSTTS KAPKGAPKPG KLKKKKKKSK KKKVAAWILG FVVGAIGGTI 300
  301 SGFVFSVLFK LIIQAIRGSE KPPGPSIFSP LIKKAEDLAF LENEEALASL EIIGRGGCGE 360
  361 VFKAELPGSN GKIIAVKKVI QPPKDADELT DEDSKFLNKK MRQIRSEINT VGHIRHRNLL 420
  421 PLLAHVSRPE CHYLVYEYME KGSLQDILTD VQAGNQELMW PARHKIALGI AAGLEYLHMD 480
  481 HNPRIIHRDL KPANVLLDDD MEARISDFGL AKAMPDAVTH ITTSHVAGTV GYIAPEFYQT 540
  541 HKFTDKCDIY SFGVILGILV IGKLPSDEFF QHTDEMSLIK WMRNIITSEN PSLAIDPKLM 600
  601 DQGFDEQMLL VLKIACYCTL DDPKQRPNSK DVRTMLSQIK H

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] PSI-BLAST 13.154902 Polygalacturonase inhibiting protein PGIP
    2 View Details [280..641] PSI-BLAST 61.522879 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • receptor activity
    		•  2.44108148686445 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.25077658159974 bayes_pls_golite062009
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • protein binding
    		•  1.69661396118522 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.62051717213565 bayes_pls_golite062009
  • kinase activity
    		•  1.58544168184546 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.44944761024618 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43632437878638 bayes_pls_golite062009
  • transferase activity
    		•  1.1388404509363 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  1.04507575991279 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.370391722473665 bayes_pls_golite062009
  • receptor binding
    		•  0.319201203357304 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.231213253402712 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.154501444195573 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle