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Protein Overview: gi|17380796, gi|...

General Information:
Name(s) found: gi|9293961 [NCBI NR]
gi|42572493 [NCBI NR]
gi|22331190 [NCBI NR]
gi|21689809 [NCBI NR]
gi|17380796 [NCBI NR]
Description(s) found:
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  • gi|9293961|dbj|BAB01864.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|42572493|ref|NP_974342.1| TTN9 (TITAN9) [Arabidopsis thaliana] [NCBI NR]
  • gi|22331190|ref|NP_188642.2| TTN9 (TITAN9) [Arabidopsis thaliana] [NCBI NR]
  • gi|21689809|gb|AAM67548.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17380796|gb|AAL36085.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LJZ4) Genomic DNA, chromosome 3, P1 clone:MAL21 (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|17380796|gb|AAL36085.1| unknown protein [Arabidopsis thaliana]gi|9293961|dbj|BAB01864.1| unnamed protein product [Arabidopsis thaliana]gi|42572493|ref|NP_974342.1| expressed protein [Arabidopsis thaliana]gi|223 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: TTN9 | TTN9 (TITAN9) | chr3:7004956-7006631 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • TTN9 (TITAN9) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: TTN9 | titan9 | chr3:7004950-7006625 REVERSE LENGTH=282 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Protein titan9 OS=Arabidopsis thaliana GN=TTN9 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 282 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: embryonic development ending in seed dormancy [IMP]
    endosperm development [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALYAKLYD KYTKLQKKKY SEYDEINKEQ EEKFLTFVSA SEELMEHLRG ENQSSLEMVE  60
   61 KLRNEIISIR SGRDDKFLEC QKLLMEEELK NKSLSEEVVK LKELVQEEHP RNYEDQSGKK 120
  121 QKRKTPESAR VTTRSMIKRS RLSEDLVETD MVSPDISKHH KAKEPLLVSQ PQCCRTTYDG 180
  181 SSSSASCTFQ ALGKHLLGMK LSTNNKGKRA CIVASHPTTG LSFSLTFINN PNGEESELLY 240
  241 KPASLGTFQR VAPEWMREVI KFSTSMCPIF FERVSRVIKL NC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..282] FFAS03 1.41 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle