YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|110741575, gi...

General Information:
Name(s) found: gi|7239512 [NCBI NR]
gi|25406126 [NCBI NR]
gi|15217597 [NCBI NR]
gi|110741575 [NCBI NR]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • gi|7239512|gb|AAF43238.1|AC012654_22 Strong similarity to the higher plant tyrosine-specific protein phosphatases (PTPs) from A. thaliana gi|3413424 expressed during embryogenesis. [Arabidopsis thaliana] [NCBI NR]
  • pir||B96741 hypothetical protein F14O23.23 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15217597|ref|NP_177330.1| ubiquitin thiolesterase [Arabidopsis thaliana] [NCBI NR]
  • gi|110741575|dbj|BAE98736.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 470 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: ubiquitin-dependent protein catabolic process [IEA]
    Molecular Function: ubiquitin thiolesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIFRSISI RRHSGHRTFA DTSAVEDTYK FVRDRGLDHA VEREKNLRPL LSIKDLIRSE  60
   61 PAKSVPISVI TSQKDSLRVP LRPIEFIRSF PSVFQEFLPG GIGIHPHISL TPEILNHDAD 120
  121 EQLVYGSETY KQGLADRLLK LLMINRINKI PLEILDLLKW DLGLPKDYVE TMVPEFPDYF 180
  181 RVIKSKLRGC SGELELVCWS NEHAVSVLEK KARTLRKGEY TKGSAIAFPM KFSNGFVVDK 240
  241 KMKKWIDDWQ KLPYISPYEN ALHLSATSDE SDKWAAAVLH EIMNLFVSKK VEKDAILHLG 300
  301 EFMGLRSRFK RVLHNHPGIF YLSSKLRTHT VVLRDGYKRG MLIESNELVT SRNRYMKLMN 360
  361 TVKKDNKAVS SSSKKEDKGK VEGEVCDTDA KAENDDISGS DVEDDRQGDF VDDDEDDDEV 420
  421 DQNQDLERGR RNSSPRSGRR SFGNSGSRDK AQSRRSKISL KTEKKRSRMY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..183] deduced N/A No confident structure predictions are available.
    2 View Details [184..395] MSA 1.042952 View MSA. No confident structure predictions are available.
    3 View Details [396..470] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle