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Protein Overview: gi|11072014, gi|...

General Information:
Name(s) found: gi|15220505 [NCBI NR]
gi|11072014 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|15220505|ref|NP_176933.1| 7S RNA binding [Arabidopsis thaliana] [NCBI NR]
  • gi|11072014|gb|AAG28893.1|AC008113_9 F12A21.20 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 651 amino acids

    Gene Ontology:
    Cellular Component: signal recognition particle [IEA]
    Biological Process: SRP-dependent cotranslational protein targeting to membrane [IEA]
    Molecular Function: 7S RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKSKENPK TSTPAIEDLF TSLHKHIKDT KYEEAVKVAD QVLSIVPTDE DAIRCKVVAL  60
   61 IKDDKFDDYL IKDVKINGAL SVINSFPIDL GFHKAYCLYR ENKLDEALVC LKGLERESKT 120
  121 LLLEAQILNC LGKVDACVDV YQKLNKSGIK LIEVNLVAAL IRAGKASQVL ESLKIRPTTT 180
  181 YQLAYNTACS LIENSNYVDA EQLLLTAMRI GQETLTEGDY SDDYIETQLA PISVQLAYVQ 240
  241 QVLGQTQESK SSYVDIIKRN LADESLALAV NNLVALKGSK DISDGLRKFD LLKDKDSQNF 300
  301 QLSQELDAKL SHKHKEAIYA NRVLLLLHAN KMDQARELCA TLPGMFPESV IPTLLQAAVL 360
  361 VRENKAAKAE ELLGQCAENF PEKSKLVLLA RAQIAASASH PHVAAESLSK IPDIQHLPAT 420
  421 VATIVALRER AGDNDGATAV LDSAIRWWSD SMTDSNMLRI LMPVAAAFKL RHGQEEEASR 480
  481 LYEEIVKNHN STDALVGLVT TLARVNVEKA EAYEKQLKPL PGLKAVDVDN LEKTSGAKPI 540
  541 EGISAASLSQ EEVKKEKVKR KRKPKYPKGF DLENSGPTPD PERWLPRRER SSYRPKRKDK 600
  601 RAAQIRGSQG ALTKVKQEEA PSTSKSKQAA ISKANAAGPS SSKASKKKSR R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..484] PSI-BLAST 30.0 No description for 2gw1A was found.
    2 View Details [485..651] PSI-BLAST 17.0 No description for 2c0lA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle