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View Structure Prediction Details

Protein: gi|11072014, gi|...
Organism: Arabidopsis thaliana
Length: 651 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11072014, gi|....

Description E-value Query
Range
Subject
Range
gi|113475191, gi... - gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum IMS101],...
313.0 [0..2] [587..31]

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Predicted Domain #1
Region A:
Residues: [1-484]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKSKENPK TSTPAIEDLF TSLHKHIKDT KYEEAVKVAD QVLSIVPTDE DAIRCKVVAL  60
   61 IKDDKFDDYL IKDVKINGAL SVINSFPIDL GFHKAYCLYR ENKLDEALVC LKGLERESKT 120
  121 LLLEAQILNC LGKVDACVDV YQKLNKSGIK LIEVNLVAAL IRAGKASQVL ESLKIRPTTT 180
  181 YQLAYNTACS LIENSNYVDA EQLLLTAMRI GQETLTEGDY SDDYIETQLA PISVQLAYVQ 240
  241 QVLGQTQESK SSYVDIIKRN LADESLALAV NNLVALKGSK DISDGLRKFD LLKDKDSQNF 300
  301 QLSQELDAKL SHKHKEAIYA NRVLLLLHAN KMDQARELCA TLPGMFPESV IPTLLQAAVL 360
  361 VRENKAAKAE ELLGQCAENF PEKSKLVLLA RAQIAASASH PHVAAESLSK IPDIQHLPAT 420
  421 VATIVALRER AGDNDGATAV LDSAIRWWSD SMTDSNMLRI LMPVAAAFKL RHGQEEEASR 480
  481 LYEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 2gw1A
Description: No description for 2gw1A was found.

Predicted Domain #2
Region A:
Residues: [485-651]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IVKNHNSTDA LVGLVTTLAR VNVEKAEAYE KQLKPLPGLK AVDVDNLEKT SGAKPIEGIS  60
   61 AASLSQEEVK KEKVKRKRKP KYPKGFDLEN SGPTPDPERW LPRRERSSYR PKRKDKRAAQ 120
  121 IRGSQGALTK VKQEEAPSTS KSKQAAISKA NAAGPSSSKA SKKKSRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 2c0lA
Description: No description for 2c0lA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle