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Protein Overview: UNG_ARATH

General Information:
Name(s) found: UNG_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana GN=UNG PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: DNA repair [ISS]
    base-excision repair [IEA]
    Molecular Function: uracil DNA N-glycosylase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTPKTLM DFFQPAKRLK ASPSSSSFPA VSVAGGSRDL GSVANSPPRV TVTTSVADDS  60
   61 SGLTPEQIAR AEFNKFVAKS KRNLAVCSER VTKAKSEGNC YVPLSELLVE ESWLKALPGE 120
  121 FHKPYAKSLS DFLEREIITD SKSPLIYPPQ HLIFNALNTT PFDRVKTVII GQDPYHGPGQ 180
  181 AMGLSFSVPE GEKLPSSLLN IFKELHKDVG CSIPRHGNLQ KWAVQGVLLL NAVLTVRSKQ 240
  241 PNSHAKKGWE QFTDAVIQSI SQQKEGVVFL LWGRYAQEKS KLIDATKHHI LTAAHPSGLS 300
  301 ANRGFFDCRH FSRANQLLEE MGIPPIDWQL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] MSA 1.075985 View MSA. No confident structure predictions are available.
    2 View Details [96..330] PSI-BLAST 108.0 Uracil-DNA glycosylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • DNA N-glycosylase activity
    		•  5.22461096584694 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing N-glycosyl compounds
    		•  4.68115068202636 bayes_pls_golite062009
  • uracil DNA N-glycosylase activity
    		•  4.48822773983461 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  2.66280504021689 bayes_pls_golite062009
  • single-strand selective uracil DNA N-glycosylase activity
    		•  2.14678866447561 bayes_pls_golite062009
  • hydrolase activity
    		•  1.91716804176625 bayes_pls_golite062009
  • catalytic activity
    		•  1.59111295908728 bayes_pls_golite062009
  • mismatch base pair DNA N-glycosylase activity
    		•  1.34999321643757 bayes_pls_golite062009
  • binding
    		•  1.2276262882727 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.22310035950527 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.901890891144085 bayes_pls_golite062009
  • DNA binding
    		•  0.850361767185031 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.543168797464517 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  0.48698673207018 bayes_pls_golite062009
  • protein binding
    		•  0.272261244770552 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle