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Protein Overview: ADLO1_ARATH

General Information:
Name(s) found: ADLO1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75219086|sp|O22161.1|ADLO1_ARATH RecName: Full=Protein ARABIDILLO 1; AltName: Full=F-box only protein 5 [NCBI NR]
  • pir||T00403 hypothetical protein At2g44900 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|2344894|gb|AAC31834.1| F-box protein family, AtFBX5 [Arabidopsis thaliana] [NCBI NR]
  • gi|18406656|ref|NP_566029.1| armadillo/beta-catenin repeat family protein / F-box family protein [Arabidopsis thaliana] [NCBI NR]
  • Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1 [Swiss-Prot]
  • (O22161) At2g44900 protein [athaliana3702.FASTAC.txt]
  • F-box protein family, AtFBX5 [Arabidopsis thaliana]gi|7486948|pir||T00403 hypothetical protein At2g44900 [imported] - Arabidopsis thalianagi|18406656|ref|NP_566029.1| armadillo/beta-catenin repeat family protein / F-box family protein [Arabidopsis thali [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Armadillo/beta-catenin repeat family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | armadillo/beta-catenin repeat family protein / F-box family protein | chr2:18518794-18522837 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • F-box protein family, AtFBX5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ubiquitin-protein ligase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 | chr2:18511719-18515762 REVERSE LENGTH=930 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 930 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: ubiquitin-dependent protein catabolic process [TAS]
    lateral root development [IGI]
    Molecular Function: ubiquitin-protein ligase activity [ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRVRRKLE EEKGKDKVVV LPSYPETSIS NEEDLVAPEL LHGFVDWISL PYDTVLQLFT  60
   61 CLNYRDRASL ASTCKTWRCL GASSCLWTSL DLRPHKFDAS MAASLASRCV NLHYLRFRGV 120
  121 ESADSLIHLK ARNLIEVSGD YCKKITDATL SMIVARHEAL ESLQLGPDFC ERITSDAIKA 180
  181 VAFCCPKLKK LRLSGIRDVT SEAIEALAKH CPQLNDLGFL DCLNIDEEAL GKVVSVRYLS 240
  241 VAGTSNIKWS IASNNWDKLP KLTGLDVSRT DIGPTAVSRF LTSSQSLKVL CALNCHVLEE 300
  301 DESLISYNRF KGKVLLALFT NVFDGLASIF ADNTKKPKDI FAYWRELMKT TKDKTINDFI 360
  361 HWIEWIISHT LLRTAECNPE GLDDFWLNEG AALLLNLMQS SQEDVQERSA TGLATFVVVD 420
  421 DENASIDCGR AEAVMKDGGI RLLLELAKSW REGLQSEAAK AIANLSVNAN IAKSVAEEGG 480
  481 IKILAGLAKS MNRLVAEEAA GGLWNLSVGE EHKNAIAQAG GVKALVDLIF RWPNGCDGVL 540
  541 ERAAGALANL AADDKCSMEV AKAGGVHALV MLARNCKYEG VQEQAARALA NLAAHGDSNN 600
  601 NNAAVGQEAG ALEALVQLTK SPHEGVRQEA AGALWNLSFD DKNRESISVA GGVEALVALA 660
  661 QSCSNASTGL QERAAGALWG LSVSEANSVA IGREGGVPPL IALARSEAED VHETAAGALW 720
  721 NLAFNPGNAL RIVEEGGVPA LVHLCSSSVS KMARFMAALA LAYMFDGRMD EYALMIGTSS 780
  781 SESTSKNISL DGARNMALKH IEAFVLSFID PHIFESPVVS STPTMLAQVT ERARIQEAGH 840
  841 LRCSGAEIGR FVTMLRNPDS TLKACAAFAL LQFTIPGGRH AMHHVSLMQN GGESRFLRSA 900
  901 AASAKTPREA KIFTKILLRN LEHHQAESSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] PSI-BLAST 22.30103 Skp2; Cyclin A/CDK2-associated p19, Skp2
    2 View Details [158..812] PSI-BLAST 31.154902 Karyopherin beta2
    3 View Details [813..930] PSI-BLAST 42.522879 No description for 2z6gA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle