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View Structure Prediction Details

Protein: ADLO1_ARATH
Organism: Arabidopsis thaliana
Length: 930 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for ADLO1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRVRRKLE EEKGKDKVVV LPSYPETSIS NEEDLVAPEL LHGFVDWISL PYDTVLQLFT  60
   61 CLNYRDRASL ASTCKTWRCL GASSCLWTSL DLRPHKFDAS MAASLASRCV NLHYLRFRGV 120
  121 ESADSLIHLK ARNLIEVSGD YCKKITDATL SMIVARH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.30103
Match: 1fqvA
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [158-812]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EALESLQLGP DFCERITSDA IKAVAFCCPK LKKLRLSGIR DVTSEAIEAL AKHCPQLNDL  60
   61 GFLDCLNIDE EALGKVVSVR YLSVAGTSNI KWSIASNNWD KLPKLTGLDV SRTDIGPTAV 120
  121 SRFLTSSQSL KVLCALNCHV LEEDESLISY NRFKGKVLLA LFTNVFDGLA SIFADNTKKP 180
  181 KDIFAYWREL MKTTKDKTIN DFIHWIEWII SHTLLRTAEC NPEGLDDFWL NEGAALLLNL 240
  241 MQSSQEDVQE RSATGLATFV VVDDENASID CGRAEAVMKD GGIRLLLELA KSWREGLQSE 300
  301 AAKAIANLSV NANIAKSVAE EGGIKILAGL AKSMNRLVAE EAAGGLWNLS VGEEHKNAIA 360
  361 QAGGVKALVD LIFRWPNGCD GVLERAAGAL ANLAADDKCS MEVAKAGGVH ALVMLARNCK 420
  421 YEGVQEQAAR ALANLAAHGD SNNNNAAVGQ EAGALEALVQ LTKSPHEGVR QEAAGALWNL 480
  481 SFDDKNRESI SVAGGVEALV ALAQSCSNAS TGLQERAAGA LWGLSVSEAN SVAIGREGGV 540
  541 PPLIALARSE AEDVHETAAG ALWNLAFNPG NALRIVEEGG VPALVHLCSS SVSKMARFMA 600
  601 ALALAYMFDG RMDEYALMIG TSSSESTSKN ISLDGARNMA LKHIEAFVLS FIDPH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.154902
Match: 1qbkB
Description: Karyopherin beta2
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [813-930]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IFESPVVSST PTMLAQVTER ARIQEAGHLR CSGAEIGRFV TMLRNPDSTL KACAAFALLQ  60
   61 FTIPGGRHAM HHVSLMQNGG ESRFLRSAAA SAKTPREAKI FTKILLRNLE HHQAESSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.522879
Match: 2z6gA
Description: No description for 2z6gA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle