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Protein Overview: GPDL1_ARATH

General Information:
Name(s) found: GPDL1_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Glycerophosphodiester phosphodiesterase GDPDL1 OS=Arabidopsis thaliana GN=GDPDL1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 763 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    apoplast [IDA]
    anchored to plasma membrane [IDA]
    anchored to membrane [TAS]
    Biological Process: glycerol metabolic process [IEA][ISS]
    lipid metabolic process [IEA]
    Molecular Function: glycerophosphodiester phosphodiesterase activity [ISS]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG  60
   61 LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD LNLANASTID RVYPNREKSY 120
  121 SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL 180
  181 NVQHDAFYEQ QNLSMSSFLL SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK 240
  241 EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ 300
  301 VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA 360
  361 TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS VQMSSDGVPF CLRSIDLRNS 420
  421 IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG 480
  481 KLISLSQFLD LAKTYTSLSG VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK 540
  541 VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD 600
  601 SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF 660
  661 PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP PAQAPNQDFI EADVTEPPLS 720
  721 PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..358] FFAS03 7.78 Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli
    2 View Details [359..672] PSI-BLAST 65.69897 Structural genomics, Crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
    3 View Details [673..763] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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