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Protein Overview: KCS13_ARATH

General Information:
Name(s) found: KCS13_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • 3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    endomembrane system [IEA]
    Biological Process: fatty acid elongation [IDA]
    very long-chain fatty acid metabolic process [IDA]
    cuticle development [IMP]
    Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups [IEA]
    catalytic activity [IEA]
    acyltransferase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIAMADFKI LLLILILISL FELDLLHFHH DFFSPFPVKI GLLLISIFFY AYSTTRSKPV  60
   61 YLVDFSCHQP TDSCKISSET FFNMAKGAQL YTDETIQFMT RILNRSGLGD DTYSPRCMLT 120
  121 SPPTPSMYEA RHESELVIFG ALNSLFKKTG IEPREVGIFI VNCSLFNPNP SLSSMIVNRY 180
  181 KLKTDVKTYN LSGMGCSAGA ISVDLATNLL KANPNTYAVI VSTENMTLSM YRGNDRSMLV 240
  241 PNCLFRVGGA AVMLSNRSQD RVRSKYELTH IVRTHKGSSD KHYTCAEQKE DSKGIVGVAL 300
  301 SKELTVVAGD SLKTNLTALG PLVLPLSEKL RFILFLVKSK LFRLKVSPYV PDFKLCFKHF 360
  361 CIHAGGRALL DAVEKGLGLS EFDLEPSRMT LHRFGNTSSS SLWYELAYVE AKCRVKRGDR 420
  421 VWQLAFGSGF KCNSIVWRAL RTIPANESLV GNPWGDSVHK YPVHVT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..466] PSI-BLAST 90.154902 Chalcone synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.61499311836466 bayes_pls_golite062009
  • transferase activity
    		•  1.02674433736465 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.95018443969363 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  0.71137845857094 bayes_pls_golite062009
  • acyltransferase activity
    		•  0.57223728364314 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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