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View Structure Prediction Details

Protein: KCS13_ARATH
Organism: Arabidopsis thaliana
Length: 466 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCS13_ARATH.

Description E-value Query
Range
Subject
Range
KCS11_ARATH - 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1
427.0 [0..1] [465..41]

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Predicted Domain #1
Region A:
Residues: [1-466]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIAMADFKI LLLILILISL FELDLLHFHH DFFSPFPVKI GLLLISIFFY AYSTTRSKPV  60
   61 YLVDFSCHQP TDSCKISSET FFNMAKGAQL YTDETIQFMT RILNRSGLGD DTYSPRCMLT 120
  121 SPPTPSMYEA RHESELVIFG ALNSLFKKTG IEPREVGIFI VNCSLFNPNP SLSSMIVNRY 180
  181 KLKTDVKTYN LSGMGCSAGA ISVDLATNLL KANPNTYAVI VSTENMTLSM YRGNDRSMLV 240
  241 PNCLFRVGGA AVMLSNRSQD RVRSKYELTH IVRTHKGSSD KHYTCAEQKE DSKGIVGVAL 300
  301 SKELTVVAGD SLKTNLTALG PLVLPLSEKL RFILFLVKSK LFRLKVSPYV PDFKLCFKHF 360
  361 CIHAGGRALL DAVEKGLGLS EFDLEPSRMT LHRFGNTSSS SLWYELAYVE AKCRVKRGDR 420
  421 VWQLAFGSGF KCNSIVWRAL RTIPANESLV GNPWGDSVHK YPVHVT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.154902
Match: 1bi5A
Description: Chalcone synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.61499311836466 bayes_pls_golite062009
transferase activity 1.02674433736465 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.95018443969363 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.71137845857094 bayes_pls_golite062009
acyltransferase activity 0.57223728364314 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle