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Protein Overview: gi|18398703, gi|...

General Information:
Name(s) found: gi|20197806 [NCBI NR]
gi|18700242 [NCBI NR]
gi|18398703 [NCBI NR]
gi|15724318 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana] [NCBI NR]
  • gi|18398703|ref|NP_565434.1| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 335 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEGLVSQES LSLNSMDMSV LERLKWVQQQ QQQLQQVVSH SSNNSPELLQ ILQFHGSNND  60
   61 ELLESSFSQF QMLGSGFGPN YNMGFGPPHE SISRTSSCHM EPVDTMEVLL KTGEETRAVA 120
  121 LKNKRKPEVK TREEQKTEKK IKVEAETESS MKGKSNMGNT EASSDTSKET SKGASENQKL 180
  181 DYIHVRARRG QATDRHSLAE RARREKISKK MKYLQDIVPG CNKVTGKAGM LDEIINYVQC 240
  241 LQRQVEFLSM KLAVLNPELE LAVEDVSVKQ AYFTNVVASK QSIMVDVPLF PLDQQGSLDL 300
  301 SAINPNQTTS IEAPSGSWET QSQSLYNTSS LGFHY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] MSA 1.776995 View MSA. No confident structure predictions are available.
    2 View Details [165..335] PSI-BLAST 15.69897 Myc prot-oncogene protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.12507195426228 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.43204604575196 bayes_pls_golite062009
  • DNA binding
    		•  0.40884226851256 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.31759335140578 bayes_pls_golite062009
  • transcription factor activity
    		•  0.09721565916723 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle