| Protein: | gi|18398703, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 335 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18398703, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
206.0 | [0..1] | [335..1] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MLEGLVSQES LSLNSMDMSV LERLKWVQQQ QQQLQQVVSH SSNNSPELLQ ILQFHGSNND 60
61 ELLESSFSQF QMLGSGFGPN YNMGFGPPHE SISRTSSCHM EPVDTMEVLL KTGEETRAVA 120
121 LKNKRKPEVK TREEQKTEKK IKVEAETESS MKGKSNMGNT EASS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [165-335] |
1 11 21 31 41 51
| | | | | |
1 DTSKETSKGA SENQKLDYIH VRARRGQATD RHSLAERARR EKISKKMKYL QDIVPGCNKV 60
61 TGKAGMLDEI INYVQCLQRQ VEFLSMKLAV LNPELELAVE DVSVKQAYFT NVVASKQSIM 120
121 VDVPLFPLDQ QGSLDLSAIN PNQTTSIEAP SGSWETQSQS LYNTSSLGFH Y
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
