Protein Overview: Y5133_ARATH

General Information:
Name(s) found:	Y5133_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|9758042\|dbj\|BAB08505.1\| unnamed protein product [Arabidopsis thaliana] [NCBI NR] gi\|54606858\|gb\|AAV34777.1\| At5g41330 [Arabidopsis thaliana] [NCBI NR] gi\|15237625\|ref\|NP_198949.1\| potassium channel tetramerisation domain-containing protein [Arabidopsis thaliana] [NCBI NR] gi\|110741215\|dbj\|BAF02158.1\| hypothetical protein [Arabidopsis thaliana] [NCBI NR] gi\|110741213\|dbj\|BAF02157.1\| hypothetical protein [Arabidopsis thaliana] [NCBI NR] BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana GN=At5g41330 PE=2 SV=1 [Swiss-Prot] (Q9FN67) Gb\|AAD56319.1 [athaliana3702.FASTAC.txt] At5g41330 [Arabidopsis thaliana]gi\|9758042\|dbj\|BAB08505.1\| unnamed protein product [Arabidopsis thaliana]gi\|15237625\|ref\|NP_198949.1\| potassium channel tetramerisation domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Potassium channel tetramerisation domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: \| potassium channel tetramerisation domain-containing protein \| chr5:16553680-16555056 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] At5g41330 [Arabidopsis thaliana] [nr-271106-contam.fasta] protein binding / voltage-gated potassium channel [Arabidopsis thaliana] [nr-271106-contam.fasta] unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta] hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: \| BTB/POZ domain with WD40/YVTN repeat-like protein \| chr5:16536452-16537828 REVERSE LENGTH=458 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	458 amino acids
Gene Ontology:
Cellular Component:	voltage-gated potassium channel complex [IEA][ISS] membrane [IEA][ISS]
Biological Process:	potassium ion transport [IEA][ISS]
Molecular Function:	voltage-gated potassium channel activity [IEA][ISS] protein binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFPTIPHES NVVSINVGGR IFQTTKQTLS LAGTDSLLSQ LATETTRFVD RDPDLFSVLL  60
   61 YILRTGNLPA RSRAFDVRDL IDESRYYGIE SFLIDSLSNS SQFEPFDLRR SRILQLNGRD 120
  121 SPSSISPTVI GGGLHVAHGS KITSFDWSLR QKSTVLTNFS AVDSLLEISP GVLAAGATDF 180
  181 PGLQIIDLDN GGFVRTTLNW ENVTRSSSTV QAIGSSHEFL FTSFESSRRN SNSIMVYDLS 240
  241 SLLPVSEIDH CEIYGADIDS AIPSTKLKWI QSCNLLMVSG SHTSPSGVNG HIRFWDVRSR 300
  301 NMVWEIKEAQ DCFSDVTVSD NLSAVFKVGV TSGEVFYADL RSLGTKDPWV CLGEEKKRNL 360
  361 NERRGVGSKI ESYGNHVFCS SKGSGIELWS EVITGLVGNA SRDVLEERVF RKNSLGKLAD 420
  421 SGENKITGLA FGGNRMFVTR KDQQSVQVWQ SPSRGISI

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..303]	PSI-BLAST	64.154902	Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
2	View Details	[304..458]	MSA	2.028978	View MSA. No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Protein Overview: Y5133_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: