| Protein: | Y5133_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 458 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y5133_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..1] | [458..1] |
|
Region A: Residues: [1-303] |
1 11 21 31 41 51
| | | | | |
1 MNFPTIPHES NVVSINVGGR IFQTTKQTLS LAGTDSLLSQ LATETTRFVD RDPDLFSVLL 60
61 YILRTGNLPA RSRAFDVRDL IDESRYYGIE SFLIDSLSNS SQFEPFDLRR SRILQLNGRD 120
121 SPSSISPTVI GGGLHVAHGS KITSFDWSLR QKSTVLTNFS AVDSLLEISP GVLAAGATDF 180
181 PGLQIIDLDN GGFVRTTLNW ENVTRSSSTV QAIGSSHEFL FTSFESSRRN SNSIMVYDLS 240
241 SLLPVSEIDH CEIYGADIDS AIPSTKLKWI QSCNLLMVSG SHTSPSGVNG HIRFWDVRSR 300
301 NMV
|
| Detection Method: |  |
| Confidence: | 64.154902 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [304-458] |
1 11 21 31 41 51
| | | | | |
1 WEIKEAQDCF SDVTVSDNLS AVFKVGVTSG EVFYADLRSL GTKDPWVCLG EEKKRNLNER 60
61 RGVGSKIESY GNHVFCSSKG SGIELWSEVI TGLVGNASRD VLEERVFRKN SLGKLADSGE 120
121 NKITGLAFGG NRMFVTRKDQ QSVQVWQSPS RGISI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
