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Protein Overview: gi|9294269, gi|1...

General Information:
Name(s) found: gi|9294269 [NCBI NR]
gi|15233034 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|9294269|dbj|BAB02171.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15233034|ref|NP_189496.1| proline-rich extensin-like family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1018 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: plant-type cell wall organization [IEA]
    Molecular Function: structural constituent of cell wall [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPSAHLVYA IGVIIMATMV AAYEPYTDSS PPPYSVPLPK VEYKSPPLPD VYSSPPPPLE  60
   61 YSPAPKVDYK SPPPPYYSPS PKVEYKSPPP PYVYNSPPPP YYSPSPKVDY KSPPPPYVYS 120
  121 SPPPPIYSPS PKVDYKSPPP PYVYSSPPPP YYSPSPKVEY KSPPSPYVYN SPPPSYYSPS 180
  181 PKVDYKSPPP PYVYSSPPPP YYSPSPKVVY KSPPPPYVYS SPPPPYYSPS PKVDYKSPPP 240
  241 PYVYSSPPPP YYSPSPKIVY KSPPPPYVYS SPPPPYYSPS PKVDYKSPPP PYVYSSPPPP 300
  301 YYSPSPKVVY KSPPPPYVYS SPPPPYYSPT PKVDYKSPPP PYVYSSPPPP YYSPSPKVDY 360
  361 KSPPPPYVYS SPPPPYYSPS PKIVYKSPPP PYVYSSPPPP YYTPSPKVVY KSPPPPYVYS 420
  421 SPPPPYYSPS PKVDYKSPPP PYVYSSPPPP YYSPSPKVVY KSPPPPYVYS SPPPPYYSPS 480
  481 PKVDYKSPPP PYVYSSPPPP YYSPSPKVLY KSPPPPYVYS SPPPPYYSPS PKVVYKSPPP 540
  541 PYVYSSPPPP YYSPSPKVVY KSPPPPYVYS SPPPPYYSPS PKVVYKSPPP PYVYSSPPPP 600
  601 YYSPSPKVYY KSPPSPYHAP SPKVLYKSPP HPHVCVCPPP PPCYSPSPKV VYKSSPPPYV 660
  661 YSSPPPPYHS PSPKVHYKSP PPPYVYSSPP PPYYSPSPKV HYKSPPPPYV YSSPPPPYYS 720
  721 PSPKVVYKSP PPPYVYSSPP PPYYSPSPKV VYKSPPPPYV YSSPPPPYYS PSPKVVYKSP 780
  781 PPPYVYSSPP PPYYSPSPKV VYKSPPPPYV YSSPPPPYYS PSPKVVYKSP PPPYVYSSPP 840
  841 PPYYSPSPKV VYKSPPPPYV YSSPPPPYYS PSPKVDYKSP PPPYVYSSPP PPYYSPSPKV 900
  901 DYKSPPPPYV YSSPPPPYYS PSPKVDYKSP PPPYVYSSPP PPYYSPAPKV DYKSPPPPYV 960
  961 YSSPPPPYYS PSPKVDYKSP PPPYYSPSPK VDYKSPPPPY VYSSPPPPSY SPSPKTEY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] MSA 1.098996 View MSA. No confident structure predictions are available.
    2 View Details [209..273] deduced N/A No confident structure predictions are available.
    3 View Details [274..387] MSA 3.121996 View MSA. No confident structure predictions are available.
    4 View Details [388..589] MSA 1.128989 View MSA. No confident structure predictions are available.
    5 View Details [590..709] MSA 3.126987 View MSA. No confident structure predictions are available.
    6 View Details [710..820] deduced N/A No confident structure predictions are available.
    7 View Details [821..926] MSA 2.111988 View MSA. No confident structure predictions are available.
    8 View Details [927..1018] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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