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Protein Overview: CISY5_ARATH

General Information:
Name(s) found: CISY5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|73917791|sp|Q9M1D3.1|CISY5_ARATH RecName: Full=Citrate synthase 5, mitochondrial; Flags: Precursor [NCBI NR]
  • gi|7076763|emb|CAB75925.1| citrate synthase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232248|ref|NP_191569.1| citrate (SI)-synthase/ transferase, transferring acyl groups, acyl groups converted into alkyl on transfer [Arabidopsis thaliana] [NCBI NR]
  • pir||T47834 citrate synthase-like protein - Arabidopsis thaliana [NCBI NR]
  • Citrate synthase 5, mitochondrial OS=Arabidopsis thaliana GN=CSY5 PE=1 SV=1 [Swiss-Prot]
  • (Q9M1D3) Citrate synthase-like protein (EC 4.1.3.7) [athaliana3702.FASTAC.txt]
  • citrate synthase-like protein [Arabidopsis thaliana]gi|15232248|ref|NP_191569.1| citrate synthase, mitochondrial, putative [Arabidopsis thaliana]gi|11268305|pir||T47834 citrate synthase-like protein - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Citrate synthase 5, mitochondrial precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • citrate synthase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • citrate (SI)-synthase/ transferase, transferring acyl groups, acyl groups converted into alkyl on transfer [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Citrate synthase 5, mitochondrial precursor [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 433 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: cellular carbohydrate metabolic process [IEA]
    tricarboxylic acid cycle [ISS]
    Molecular Function: citrate (Si)-synthase activity [IEA][ISS]
    transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMQDLKSQM QEIIPEQQDR LKKLKSEQGK VPVGNITVDM VLGGMRGMTG LLWETSLLDA  60
   61 DEGIRFRGMS IPECQKILPS AESGEEPLPE SLLWLLLTGK VPTKEQANAL STELAHRAAV 120
  121 PAIDALPSTA HPMTQFASGV MALQVQSEFQ KAYEQGDISK SKYWEPTFED ALNLIARVPV 180
  181 VASYVYRRMY KDGSIIPLDD SLDYGANFSH MLGFDSPQMK ELMRLYVTIH SDHEGGNVSA 240
  241 HAGHLVGSAL SDPYLSFAAA LNGLAGPLHG LANQEVLLWI KLVVEECGES ISKEQLKDYV 300
  301 WKTLNSGKVV PGYGHGVLRK TDPRYICQRE FALKHLPDDP LFQLVSKLYE VVPPILTELG 360
  361 KVKNPWPNVD AHSGVLLNYY GLTEARYYTV LFGVSRSLGI CSQLIWDRAL GLPLERPKSV 420
  421 NMDWLDNFTR LNR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..433] PSI-BLAST 135.0 CRYSTALLOGRAPHIC REFINEMENT AND ATOMIC MODELS OF TWO DIFFERENT FORMS OF CITRATE SYNTHASE AT 2.7 AND 1.7 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • citrate (Si)-synthase activity
    		•  7.90380661459876 bayes_pls_golite062009
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  7.35970609422108 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  4.98392594633005 bayes_pls_golite062009
  • catalytic activity
    		•  2.51855037019879 bayes_pls_golite062009
  • transferase activity
    		•  1.52308910034898 bayes_pls_golite062009
  • binding
    		•  1.15467737113069 bayes_pls_golite062009
  • protein binding
    		•  0.210158634792359 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle