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Protein Overview: REV1_ARATH

General Information:
Name(s) found: REV1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|186529382|ref|NP_001119373.1| REV1; DNA-directed DNA polymerase [Arabidopsis thaliana] [NCBI NR]
  • gi|125656400|gb|ABN48548.1| polymerase ATREV1-1105 [Arabidopsis thaliana] [NCBI NR]
  • DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 PE=2 SV=1 [Swiss-Prot]
  • | Symbols: REV1 | REV1 (Reversionless 1); damaged DNA binding / magnesium ion binding / nucleotidyltransferase | chr5:18069896-18076808 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: REV1, ATREV1 | DNA-directed DNA polymerases | chr5:18052669-18059581 FORWARD LENGTH=1105 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1105 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: DNA repair [ISS]
    response to DNA damage stimulus [IMP]
    response to UV-B [IMP]
    Molecular Function: DNA-directed DNA polymerase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV  60
   61 KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI PSHQELKGYM MKYGGRFENY 120
  121 FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT 180
  181 QPKLSAFFAP RSHLTPQMAS PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY 240
  241 IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG 300
  301 KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA 360
  361 DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV AVCHSDNPKG TAEISSANYP 420
  421 ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL 480
  481 DVSDLSDVET EVLASTIRNE ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV 540
  541 EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG 600
  601 LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VFILVQHFLQ CLCKEVSLRL QGCEMIGRTF 660
  661 TLKIKKRKKD AEEPTKYMGC GDCDNLSRSI TVPAATDDIE VLQRISKKLF GSFCLDVKEV 720
  721 RGVGLQVSKL DSADPSNKGS RTLKSWLSSA PAVVQIEQDD NVFAAKVREN SDCNRPVTGG 780
  781 VSRLRESNSE ESSIQSGDTN SSLPPMCYLD MEVLENLPPE LLSELDGTYG GKLFELIEKK 840
  841 RGKRRINCNS PHVSLDGTAA SIKELKSLSV KIHGLSTSGE KEYKEPYVPH PSIARTSNQH 900
  901 TIEMTDLLPS SLSQVDVSVL QELPEELRAD VLGAFPSHRR QQSSSDVPKE TCKKQDEEPI 960
  961 DLKGTENEIG LSFSSLWFGN PPLWTEKFKV SGNCTMEKLS AIYFKVAQSR PMLSLVLQHA1020
 1021 ISEMSSFPDA ASASDLDKAI YDVCELLKQY INLKVGGDIE EIYLCFRLLK RLAARSQLFL1080
 1081 QVYEILSPFI QASISEHYGG SLSIP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..177] PSI-BLAST 25.522879 No description for 2ebwA was found.
    3 View Details [178..323] deduced N/A No confident structure predictions are available.
    4 View Details [324..797] PSI-BLAST 50.0 Ternary complex of the catalytic core of REV1 with DNA and dCTP.
    5 View Details [798..884] deduced N/A No confident structure predictions are available.
    6 View Details [885..1105] MSA 4.184996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle