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Protein Overview: gi|9758195, gi|1...

General Information:
Name(s) found: gi|9758195 [NCBI NR]
gi|15242114 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|9758195|dbj|BAB08669.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15242114|ref|NP_199966.1| ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1149 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: ubiquitin-dependent protein catabolic process [IEA]
    Molecular Function: ubiquitin thiolesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKPSFLEDV EVIKLITKSR EEFVKGNHCK ALEILEDLIF DHKKDKDSWF LHIKQGTMFV  60
   61 KLEDITENPD VGFAYLVASV QCYSQDVILS RLCAMGFYNL AKQLGSVSYY KQCVKKSKQD 120
  121 LSVTYPENTS PVARSMLQEL KKDMNKEFNT LIRDAERMIA GAKTSPLSSE SKVWEPKKSS 180
  181 DLVDDEIQEL RSYWMGLDIK IKRDFMKVSI AKLKSFVEGV HNREGRDVFE KVLTSAKADR 240
  241 KWTFWMCRSK CLKKLSSAEE CKNHFEQQHD ADFKNASKKD MVQRIGKDWA RKISVGAWEP 300
  301 VDTVAAVEMI KNRLADVKAF APKNGWSEEW PLAADEDRSK LLKEIKLLLV SLCDHKILPS 360
  361 SIREWLMRFP VQHLAKLDVS EQSLIDSHLV GTPQSICFLE SHELNQILDF LKTIKCKRND 420
  421 GTDLVCRAVN SFLDHTRVKE KIDFDPQFSF LLLDKRLLKC KDVPFDDEGT INVFDPNAHY 480
  481 AKAPAQGDDI ISWLTDYNSV DTIFPRPIRE HNFGIWVAVL KAVQFTFSFL GKKYAKKYLV 540
  541 LDYDAALTVV ENLCMSEDER RKNLLEDQWN KYASLLCDSC EERVSENSIT ANFFLWAVRD 600
  601 VLQGASHPTF DFLDSEDCMN LIRQRKSLGD DIALKSIHHL KSVVTHKVLL IDSKILLIDN 660
  661 SRITLLTNLT RLSAFDNRTY ILRLLKPFLL NEIVNMESNA KSDIAAAYLL LEEEKKSRSK 720
  721 KKKNNKRNST SLSTPLDKTV EHEPSVDLEP GVTSPSLKIV KEDFMEPEDT RAGERGRLEI 780
  781 SSNTDNQEEA TKFDPDMQNM PREDSLSEHM ESASGEASAR YNSALDMTLK LILDLFTFLF 840
  841 SLISSQKHVV LQALLNIKIL KEYLMHNMQP FQDHLEEPVP SALQTLFTAF VSEDIKIEGV 900
  901 YSCLLSDLLV SVEEMFSMVC VEKLSDADAA EVVVAIFEFW HCWKYRERES LVTRLFTLEE 960
  961 NERMSCIKCR SRPNYPEQRS HGIVVAADSI RDLKCALGNM KFVDILKVTR MEYKMLCDTR1020
 1021 SGGCGRTNIV HHIISRCPPI FTIVLEWEKS ETEKEISETT KALEWEIDIS RLYEGLEPNT1080
 1081 NYRLVSMVGC SEVEEEHICI AYEKNRWVNL KRESLVGEDI GNWKSVVRFC GEKKVRPEIL1140
 1141 FYEAARWMA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..247] PSI-BLAST 6.30103 PP5 structure
    2 View Details [248..443] deduced N/A No confident structure predictions are available.
    3 View Details [444..670] deduced N/A No confident structure predictions are available.
    4 View Details [671..746] deduced N/A No confident structure predictions are available.
    5 View Details [747..1149] PSI-BLAST 43.69897 No description for 2gfoA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle