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Protein Overview: gi|15221336, gi|...

General Information:
Name(s) found: gi|25294088 [NCBI NR]
gi|15221336 [NCBI NR]
gi|12324809 [NCBI NR]
gi|119360019 [NCBI NR]
Description(s) found:
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  • pir||F96775 hypothetical protein F1M20.33 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15221336|ref|NP_177603.1| MYB31 (MYB DOMAIN PROTEIN 31); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|12324809|gb|AAG52371.1|AC011765_23 putative MYB family transcription factor; 97813-99093 [Arabidopsis thaliana] [NCBI NR]
  • gi|119360019|gb|ABL66738.1| At1g74650 [Arabidopsis thaliana] [NCBI NR]
  • (Q9CA52) Putative MYB family transcription factor [athaliana3702.FASTAC.txt]
  • putative MYB family transcription factor; 97813-99093 [Arabidopsis thaliana]gi|15221336|ref|NP_177603.1| myb family transcription factor (cY13) [Arabidopsis thaliana]gi|25294088|pir||F96775 hypothetical protein F1M20.33 [imported] - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • | Symbols: AtY13, AtMYB31 | AtMYB31/AtY13 (myb domain protein 31); DNA binding / transcription factor | chr1:28045154-28046434 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative MYB family transcription factor; 97813-99093 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATY13, ATMYB31, MYB31 | myb domain protein 31 | chr1:28041493-28042773 FORWARD LENGTH=330 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g74650 OS=Arabidopsis thaliana GN=F1M20.33 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to gibberellin stimulus [IEP]
    regulation of transcription, DNA-dependent [ISS]
    response to salicylic acid stimulus [IEP]
    response to chitin [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRPPCCEKI EVKKGPWTPE EDIILVSYIQ QHGPGNWRSV PANTGLLRCS KSCRLRWTNY  60
   61 LRPGIKRGNF TQPEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLVMMK 120
  121 FQNGIINENK TNLATDISSC NNNNNGCNHN KRTTNKGQWE KKLQTDINMA KQALFQALSL 180
  181 DQPSSLIPPD PDSPKPHHHS TTTYASSTDN ISKLLQNWTS SSSSKPNTSS VSNNRSSSPG 240
  241 EGGLFDHHSL FSSNSESGSV DEKLNLMSET SMFKGESKPD IDMEATPTTT TTDDQGSLSL 300
  301 IEKWLFDDQG LVQCDDSQED LIDVSLEELK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] PSI-BLAST 37.39794 c-Myb, DNA-binding domain
    2 View Details [119..330] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle