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Protein Overview: RGA_ARATH

General Information:
Name(s) found: RGA_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 587 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][TAS]
    Biological Process: negative regulation of gibberellic acid mediated signaling pathway [IGI]
    hyperosmotic salinity response [IGI]
    negative regulation of seed germination [IGI]
    response to abscisic acid stimulus [IGI]
    response to salt stress [IGI]
    response to far red light [IEP]
    regulation of oxygen and reactive oxygen species metabolic process [IGI]
    regulation of protein catabolic process [IMP]
    gibberellic acid mediated signaling pathway [TAS]
    regulation of transcription [TAS]
    jasmonic acid mediated signaling pathway [IGI]
    response to ethylene stimulus [IGI]
    Molecular Function: transcription factor activity [IDA][ISS][TAS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRDHHQFQG RLSNHGTSSS SSSISKDKMM MVKKEEDGGG NMDDELLAVL GYKVRSSEMA  60
   61 EVALKLEQLE TMMSNVQEDG LSHLATDTVH YNPSELYSWL DNMLSELNPP PLPASSNGLD 120
  121 PVLPSPEICG FPASDYDLKV IPGNAIYQFP AIDSSSSSNN QNKRLKSCSS PDSMVTSTST 180
  181 GTQIGGVIGT TVTTTTTTTT AAGESTRSVI LVDSQENGVR LVHALMACAE AIQQNNLTLA 240
  241 EALVKQIGCL AVSQAGAMRK VATYFAEALA RRIYRLSPPQ NQIDHCLSDT LQMHFYETCP 300
  301 YLKFAHFTAN QAILEAFEGK KRVHVIDFSM NQGLQWPALM QALALREGGP PTFRLTGIGP 360
  361 PAPDNSDHLH EVGCKLAQLA EAIHVEFEYR GFVANSLADL DASMLELRPS DTEAVAVNSV 420
  421 FELHKLLGRP GGIEKVLGVV KQIKPVIFTV VEQESNHNGP VFLDRFTESL HYYSTLFDSL 480
  481 EGVPNSQDKV MSEVYLGKQI CNLVACEGPD RVERHETLSQ WGNRFGSSGL APAHLGSNAF 540
  541 KQASMLLSVF NSGQGYRVEE SNGCLMLGWH TRPLITTSAW KLSTAAY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] MSA 1.022992 View MSA. No confident structure predictions are available.
    2 View Details [91..234] MSA 2.119993 View MSA. No confident structure predictions are available.
    3 View Details [235..395] MSA 2.129977 View MSA. No confident structure predictions are available.
    4 View Details [396..587] MSA 5.135963 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle