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Protein Overview: SNC1_ARATH

General Information:
Name(s) found: SNC1_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1301 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: defense response to bacterium, incompatible interaction [NAS]
    systemic acquired resistance, salicylic acid mediated signaling pathway [IMP]
    defense response [ISS]
    response to auxin stimulus [IGI]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIASSSGSR RYDVFPSFRG EDVRDSFLSH LLKELRGKAI TFIDDEIERS RSIGPELLSA  60
   61 IKESRIAIVI FSKNYASSTW CLNELVEIHK CYTNLNQMVI PIFFHVDASE VKKQTGEFGK 120
  121 VFEETCKAKS EDEKQSWKQA LAAVAVMAGY DLRKWPSEAA MIEELAEDVL RKTMTPSDDF 180
  181 GDLVGIENHI EAIKSVLCLE SKEARIMVGI WGQSGIGKST IGRALYSKLS IQFHHRAFIT 240
  241 YKSTSGSDVS GMKLRWEKEL LSEILGQKDI KIEHFGVVEQ RLKQQKVLIL LDDVDSLEFL 300
  301 KTLVGKAEWF GSGSRIIVIT QDRQLLKAHE IDLIYEVEFP SEHLALTMLC RSAFGKDSPP 360
  361 DDFKELAFEV AKLAGNLPLG LSVLGSSLKG RTKEWWMEMM PRLRNGLNGD IMKTLRVSYD 420
  421 RLHQKDQDMF LYIACLFNGF EVSYVKDLLK DNVGFTMLTE KSLIRITPDG YIEMHNLLEK 480
  481 LGREIDRAKS KGNPGKRRFL TNFEDIHEVV TEKTGTETLL GIRLPFEEYF STRPLLIDKE 540
  541 SFKGMRNLQY LEIGYYGDLP QSLVYLPLKL RLLDWDDCPL KSLPSTFKAE YLVNLIMKYS 600
  601 KLEKLWEGTL PLGSLKEMNL RYSNNLKEIP DLSLAINLEE LDLVGCKSLV TLPSSIQNAT 660
  661 KLIYLDMSDC KKLESFPTDL NLESLEYLNL TGCPNLRNFP AIKMGCSDVD FPEGRNEIVV 720
  721 EDCFWNKNLP AGLDYLDCLT RCMPCEFRPE QLAFLNVRGY KHEKLWEGIQ SLGSLEGMDL 780
  781 SESENLTEIP DLSKATKLES LILNNCKSLV TLPSTIGNLH RLVRLEMKEC TGLEVLPTDV 840
  841 NLSSLETLDL SGCSSLRSFP LISTNIVWLY LENTAIEEIP STIGNLHRLV RLEMKKCTGL 900
  901 EVLPTDVNLS SLETLDLSGC SSLRSFPLIS ESIKWLYLEN TAIEEIPDLS KATNLKNLKL 960
  961 NNCKSLVTLP TTIGNLQKLV SFEMKECTGL EVLPIDVNLS SLMILDLSGC SSLRTFPLIS1020
 1021 TNIVWLYLEN TAIEEIPSTI GNLHRLVKLE MKECTGLEVL PTDVNLSSLM ILDLSGCSSL1080
 1081 RTFPLISTRI ECLYLQNTAI EEVPCCIEDF TRLTVLMMYC CQRLKTISPN IFRLTRLELA1140
 1141 DFTDCRGVIK ALSDATVVAT MEDHVSCVPL SENIEYIWDK LYHLPSKLNF NDVEFKFCCS1200
 1201 NRIKECGVRL MYVSQEENNQ QTTRSEKRMR MTSGTSEEDI NLPYGLIVAD TGLAALNMEL1260
 1261 SLGQGEPSSS TSLEGEALCV DYMITEEQDK GIPILFPVSG N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] Pfam 58.657577 No description for PF01582.12 was found. No confident structure predictions are available.
    2 View Details [156..622] PSI-BLAST 13.69897 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [623..1206] PSI-BLAST 26.221849 No description for 3cigA was found.
    4 View Details [1207..1301] PSI-BLAST 24.39794 Leucine rich effector protein YopM


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle