| Protein: | SNC1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1301 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for SNC1_ARATH.
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Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MEIASSSGSR RYDVFPSFRG EDVRDSFLSH LLKELRGKAI TFIDDEIERS RSIGPELLSA 60
61 IKESRIAIVI FSKNYASSTW CLNELVEIHK CYTNLNQMVI PIFFHVDASE VKKQTGEFGK 120
121 VFEETCKAKS EDEKQSWKQA LAAVAVMAGY DLRKW
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| Detection Method: |  |
| Confidence: | 58.657577 |
| Match: | PF01582.12 |
| Description: | No description for PF01582.12 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [156-622] |
1 11 21 31 41 51
| | | | | |
1 PSEAAMIEEL AEDVLRKTMT PSDDFGDLVG IENHIEAIKS VLCLESKEAR IMVGIWGQSG 60
61 IGKSTIGRAL YSKLSIQFHH RAFITYKSTS GSDVSGMKLR WEKELLSEIL GQKDIKIEHF 120
121 GVVEQRLKQQ KVLILLDDVD SLEFLKTLVG KAEWFGSGSR IIVITQDRQL LKAHEIDLIY 180
181 EVEFPSEHLA LTMLCRSAFG KDSPPDDFKE LAFEVAKLAG NLPLGLSVLG SSLKGRTKEW 240
241 WMEMMPRLRN GLNGDIMKTL RVSYDRLHQK DQDMFLYIAC LFNGFEVSYV KDLLKDNVGF 300
301 TMLTEKSLIR ITPDGYIEMH NLLEKLGREI DRAKSKGNPG KRRFLTNFED IHEVVTEKTG 360
361 TETLLGIRLP FEEYFSTRPL LIDKESFKGM RNLQYLEIGY YGDLPQSLVY LPLKLRLLDW 420
421 DDCPLKSLPS TFKAEYLVNL IMKYSKLEKL WEGTLPLGSL KEMNLRY
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| Detection Method: | |
| Confidence: | 13.69897 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [623-1206] |
1 11 21 31 41 51
| | | | | |
1 SNNLKEIPDL SLAINLEELD LVGCKSLVTL PSSIQNATKL IYLDMSDCKK LESFPTDLNL 60
61 ESLEYLNLTG CPNLRNFPAI KMGCSDVDFP EGRNEIVVED CFWNKNLPAG LDYLDCLTRC 120
121 MPCEFRPEQL AFLNVRGYKH EKLWEGIQSL GSLEGMDLSE SENLTEIPDL SKATKLESLI 180
181 LNNCKSLVTL PSTIGNLHRL VRLEMKECTG LEVLPTDVNL SSLETLDLSG CSSLRSFPLI 240
241 STNIVWLYLE NTAIEEIPST IGNLHRLVRL EMKKCTGLEV LPTDVNLSSL ETLDLSGCSS 300
301 LRSFPLISES IKWLYLENTA IEEIPDLSKA TNLKNLKLNN CKSLVTLPTT IGNLQKLVSF 360
361 EMKECTGLEV LPIDVNLSSL MILDLSGCSS LRTFPLISTN IVWLYLENTA IEEIPSTIGN 420
421 LHRLVKLEMK ECTGLEVLPT DVNLSSLMIL DLSGCSSLRT FPLISTRIEC LYLQNTAIEE 480
481 VPCCIEDFTR LTVLMMYCCQ RLKTISPNIF RLTRLELADF TDCRGVIKAL SDATVVATME 540
541 DHVSCVPLSE NIEYIWDKLY HLPSKLNFND VEFKFCCSNR IKEC
|
| Detection Method: | |
| Confidence: | 26.221849 |
| Match: | 3cigA |
| Description: | No description for 3cigA was found. |
|
Region A: Residues: [1207-1301] |
1 11 21 31 41 51
| | | | | |
1 GVRLMYVSQE ENNQQTTRSE KRMRMTSGTS EEDINLPYGL IVADTGLAAL NMELSLGQGE 60
61 PSSSTSLEGE ALCVDYMITE EQDKGIPILF PVSGN
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| Detection Method: | |
| Confidence: | 24.39794 |
| Match: | 1g9uA |
| Description: | Leucine rich effector protein YopM |
Matching Structure (courtesy of the PDB): |
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