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Protein Overview: THIC_ARATH

General Information:
Name(s) found: THIC_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Phosphomethylpyrimidine synthase, chloroplastic OS=Arabidopsis thaliana GN=THIC PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 644 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    plastid [IDA]
    Biological Process: detection of bacterium [IMP]
    response to vitamin B1 [IEP]
    thiamin biosynthetic process [IMP][ISS]
    Molecular Function: ADP-ribose pyrophosphohydrolase activity [IGI]
    catalytic activity [ISS]
    iron-sulfur cluster binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASVHCTLM SVVCNNKNHS ARPKLPNSSL LPGFDVVVQA AATRFKKETT TTRATLTFDP  60
   61 PTTNSERAKQ RKHTIDPSSP DFQPIPSFEE CFPKSTKEHK EVVHEESGHV LKVPFRRVHL 120
  121 SGGEPAFDNY DTSGPQNVNA HIGLAKLRKE WIDRREKLGT PRYTQMYYAK QGIITEEMLY 180
  181 CATREKLDPE FVRSEVARGR AIIPSNKKHL ELEPMIVGRK FLVKVNANIG NSAVASSIEE 240
  241 EVYKVQWATM WGADTIMDLS TGRHIHETRE WILRNSAVPV GTVPIYQALE KVDGIAENLN 300
  301 WEVFRETLIE QAEQGVDYFT IHAGVLLRYI PLTAKRLTGI VSRGGSIHAK WCLAYHKENF 360
  361 AYEHWDDILD ICNQYDVALS IGDGLRPGSI YDANDTAQFA ELLTQGELTR RAWEKDVQVM 420
  421 NEGPGHVPMH KIPENMQKQL EWCNEAPFYT LGPLTTDIAP GYDHITSAIG AANIGALGTA 480
  481 LLCYVTPKEH LGLPNRDDVK AGVIAYKIAA HAADLAKQHP HAQAWDDALS KARFEFRWMD 540
  541 QFALSLDPMT AMSFHDETLP ADGAKVAHFC SMCGPKFCSM KITEDIRKYA EENGYGSAEE 600
  601 AIRQGMDAMS EEFNIAKKTI SGEQHGEVGG EIYLPESYVK AAQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] deduced N/A No confident structure predictions are available.
    2 View Details [84..211] MSA 3.072977 View MSA. No confident structure predictions are available.
    3 View Details [212..453] deduced N/A No confident structure predictions are available.
    4 View Details [454..644] MSA 3.072935 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle