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Protein Overview: gi|15219566, gi|...

General Information:
Name(s) found: gi|4204314 [NCBI NR]
gi|25406745 [NCBI NR]
gi|15219566 [NCBI NR]
Description(s) found:
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  • gi|4204314|gb|AAD10695.1| Hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • pir||H86168 hypothetical protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15219566|ref|NP_171879.1| guanylate-binding family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9ZWA5) F11M21.24 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein [imported] - Arabidopsis thalianagi|15219566|ref|NP_171879.1| guanylate-binding family protein [Arabidopsis thaliana]gi|4204314|gb|AAD10695.1| Hypothetical protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Guanylate-binding family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | guanylate-binding family protein | chr1:962127-966621 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • GTP binding / GTPase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | guanylate-binding family protein | chr1:962128-966622 REVERSE LENGTH=991 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • F11M21.24 protein OS=Arabidopsis thaliana GN=F11M21.24 PE=4 SV=1 [ARATH-contam.fasta]
  • Isoform of F4I2I5, F11M21.24 protein OS=Arabidopsis thaliana GN=F11M21.24 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 991 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: immune response [ISS]
    Molecular Function: GTP binding [IEA][ISS]
    GTPase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNPTDESGR AVQLVYVDEN GKLKTDPEAI GALQKLKGPV AVVSLFGKAL QGKSFIWNQL  60
   61 LSRSIGFEVQ TLHRPCNGDI WMWIEPVKRI SEDGTEYSLV LLDVELEDAK SIPTLGLNDI 120
  121 ALDLSRLLEI RKQDHVGEAK DNTFFELGQF SPMFVQLMMD INSETVEGGE DVTQNSKLKK 180
  181 LRPLLLYGVD ALMKFVSERV RPKQRGDTIV TGPPLAGFTK AFSENVNNNI VPKISSLWQT 240
  241 VEELEGRRAR DTATEVYMSS LERSETPDES MLLEAHNKAV VEALTAFCES SIGNVEVKQK 300
  301 YKRDLWSFFA KALEDHKRVA NVEAYSRCCN AIEDMGKKLW ALPCSQDANI GDMIKALDTA 360
  361 VAEYEASING PMKWQKLSSF LRESVQDILV HRRGNQMDEL MSENSKLKLQ QQSLESTMNL 420
  421 LKKQLEGREK MNKEYQKRYE SAIDDICKLS DQFKNRINDL ESKCKSIHDE HSNLMEVLGS 480
  481 TRLEASEWKR KYEGTLDENG VSNIRVGVDA SITRCSNKLI DWKIKYENTV SEQKAVTEKI 540
  541 AAMEEKLKQA STTEDGLRAE FSRVLDEKEK IITEKAAKLA TLEQQLASTR AELKKSALKV 600
  601 DECSSEAKDV RLQMSLLNEK YESVKSASEL LETETETLKR EKDELDKKCH IHLEELEKLV 660
  661 LRLTNVESEA LEAKKLVDSL KLEAEAARDN ENKLQTSLVE RCIEIDRAKS RIEELEKVCT 720
  721 LNSGEGEASA SKKLVDSMKM EAEASRKNEN KLQTLLEDKC IEIDRAKSRI EGLERDCLKL 780
  781 KYAESEAATV KELVSSMKME VESARSNEKK LQLSLQEKTI EIDRAKGQIE ALERQKMELS 840
  841 ETLETRAKQN EEEVTKWQRI INAEKSKNIR ENLMEKEDSF MVWDEATPMQ RVKRLKVEAA 900
  901 VTCSGSDFAQ ETEEDSVSQE SRKVRTMTPR RCTSSEAGAT SSSTGTGHSK YTMKKLRTEI 960
  961 LEHGFGAELV GLKNPRKRDL VQLYERTVLR K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] PSI-BLAST 42.154902 Crystal-structure of the N-terminal Large GTPase Domain of human Guanylate Binding protein 1 (hGBP1) in complex with GMP/AlF4
    2 View Details [189..385] Pfam 41.721246 No description for PF02841.6 was found. No confident structure predictions are available.
    3 View Details [386..689] PSI-BLAST 16.522879 Heavy meromyosin subfragment
    4 View Details [690..888] PSI-BLAST 5.69897 No description for 2i1jA was found.
    5 View Details [889..991] MSA 1.434994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle