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Protein Overview: AIB_ARATH

General Information:
Name(s) found: AIB_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 566 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to abscisic acid stimulus [IMP]
    response to wounding [IEP]
    regulation of transcription [TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK KLSSLVDWPN  60
   61 SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES KVVRSYNFNN MGAEEETWQD 120
  121 MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV 180
  181 WLSDAVNSES DYCFRSFMAK SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM 240
  241 RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG 300
  301 PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR 360
  361 PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRSVVPN 420
  421 ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE 480
  481 VVVRVISPLD SHPASRIIQA MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL 540
  541 IAAFYPETSS TQPPLPSSSS QVSGDI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] deduced N/A No confident structure predictions are available.
    2 View Details [109..240] FFAS03 1.28 Crystal structure of an hypothetical protein
    3 View Details [241..375] deduced N/A No confident structure predictions are available.
    4 View Details [376..467] PSI-BLAST 14.39794 SREBP-1a
    5 View Details [468..566] FFAS03 0.968 ACT domain protein from Streptococcus pneumoniae

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.12507195426228 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.43204604575196 bayes_pls_golite062009
  • DNA binding
    		•  0.40884226851256 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.31759335140578 bayes_pls_golite062009
  • transcription factor activity
    		•  0.09721565916723 bayes_pls_golite062009
    5
    Term Confidence Notes
  • catalytic activity
    		•  0.0923752113053079 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle