| Protein: | AIB_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 566 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIB_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
462.0 | [0..1] | [566..1] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK KLSSLVDWPN 60
61 SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES KVVRSYNF
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-240] |
1 11 21 31 41 51
| | | | | |
1 NNMGAEEETW QDMRKRVLQK LHRLFGGSDE DNYALSLEKV TATEIFFLAS MYFFFNHGEG 60
61 GPGRCYSSGK HVWLSDAVNS ESDYCFRSFM AKSAGIRTIV MVPTDAGVLE LGSVWSLPEN 120
121 IGLVKSVQAL FM
|
| Detection Method: | |
| Confidence: | 1.28 |
| Match: | 1vhmA |
| Description: | Crystal structure of an hypothetical protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [241-375] |
1 11 21 31 41 51
| | | | | |
1 RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG 60
61 PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR 120
121 PVSLLAGAGI VSVVD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [376-467] |
1 11 21 31 41 51
| | | | | |
1 EKRPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR SVVPNISKMD KASLLGDAIS 60
61 YIKELQEKVK IMEDERVGTD KSLSESNTIT VE
|
| Detection Method: | |
| Confidence: | 14.39794 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
|
Region A: Residues: [468-566] |
1 11 21 31 41 51
| | | | | |
1 ESPEVDIQAM NEEVVVRVIS PLDSHPASRI IQAMRNSNVS LMEAKLSLAE DTMFHTFVIK 60
61 SNNGSDPLTK EKLIAAFYPE TSSTQPPLPS SSSQVSGDI
|
| Detection Method: | |
| Confidence: | 0.968 |
| Match: | 1zpvA |
| Description: | ACT domain protein from Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.0923752113053079 | bayes_pls_golite062009 |
