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Protein Overview: LAC9_ARATH

General Information:
Name(s) found: LAC9_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 586 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IEA]
    endomembrane system [IEA]
    Biological Process: lignin catabolic process [IEA]
    oxidation reduction [IEA]
    Molecular Function: laccase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRVHHSLSN QAFLVLLLFS SIASAAIVEH VLHVKDVVVT PLCKEQMIPI VNGSLPGPTI  60
   61 NVREGDTLVV HVINKSTYNV TIHWHGVFQL KSVWMDGANM ITQCPIQPSN NFTYQFDITG 120
  121 QEGTLLWHAH VVNLRATIHG ALIIRPRSGR PYPFPKPYKE VPLIFQQWWD TDVRLLELRP 180
  181 APVSDAYLIN GLAGDSYPCS KNRMFNLKVV QGKTYLLRII NAALNTHLFF KIANHNVTVV 240
  241 AVDAVYTTPY LTDVMILTPG QTIDAILTAD QPIGTYYMAI IPYFSAIGVP ASPDTKPTRG 300
  301 LIVYEGATSS SSPTKPWMPP ANDIPTAHRF SSNITSLVGG PHWTPVPRHV DEKMFITMGL 360
  361 GLDPCPSNAK CVGPLDQRLA GSLNNRTFMI PERISMQEAY FYNITGVYTD DFPDQPPLKF 420
  421 DFTKFEQHPT NSDMEMMFPE RKTSVKTIRF NSTVEIVLQN TGILTPESHP MHLHGFNFYV 480
  481 LGYGFGNYDP IRDARKLNLF NPQMHNTVGV PPGGWVVLRF IANNPGIWLF HCHMDAHLPL 540
  541 GIMMAFIVQN GPTRETSLPS PPSNLPQCTR DPTIYDSRTT NVDMSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..586] PSI-BLAST 98.39794 Ascorbate oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  5.98463819317772 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.80679334235027 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.70382790500795 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  4.35501871300326 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.30470923318097 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  3.4840258390283 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.9428517783106 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.82570802206273 bayes_pls_golite062009
  • transporter activity
    		•  2.75690053147562 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.67027550825653 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.42871678736924 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.88441243755534 bayes_pls_golite062009
  • copper ion binding
    		•  1.67952903413921 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.49034416929059 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  1.17954317549442 bayes_pls_golite062009
  • copper ion transmembrane transporter activity
    		•  0.96418286916503 bayes_pls_golite062009
  • ferroxidase activity
    		•  0.948067553932463 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions, oxygen as acceptor
    		•  0.948067553932463 bayes_pls_golite062009
  • binding
    		•  0.89678532754402 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions
    		•  0.84656625234389 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.530231637345107 bayes_pls_golite062009
  • catalytic activity
    		•  0.363071622766357 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.269767937058687 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  0.233785530643069 bayes_pls_golite062009
  • cytochrome-c oxidase activity
    		•  0.0760986706873972 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.0760986706873972 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.0760986706873972 bayes_pls_golite062009
  • protein binding
    		•  0.0393017564630179 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.0246677473353576 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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