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Protein Overview: CSN5B_ARATH

General Information:
Name(s) found: CSN5B_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana GN=CSN5B PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 357 amino acids

    Gene Ontology:
    Cellular Component: signalosome [IPI][TAS]
    Biological Process: photomorphogenesis [TAS]
    specification of floral organ identity [IMP]
    G2 phase of mitotic cell cycle [IMP]
    protein deneddylation [TAS]
    signalosome assembly [IMP]
    negative regulation of photomorphogenesis [IGI]
    response to auxin stimulus [IGI]
    cullin deneddylation [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGSSSAIAR KTWELENNIL PVEPTDSASD SIFHYDDASQ AKIQQEKPWA SDPNYFKRVH  60
   61 ISALALLKMV VHARSGGTIE IMGLMQGKTE GDTIIVMDAF ALPVEGTETR VNAQSDAYEY 120
  121 MVEYSQTSKL AGRLENVVGW YHSHPGYGCW LSGIDVSTQM LNQQYQEPFL AVVIDPTRTV 180
  181 SAGKVEIGAF RTYPEGHKIS DDHVSEYQTI PLNKIEDFGV HCKQYYSLDI TYFKSSLDSH 240
  241 LLDLLWNKYW VNTLSSSPLL GNGDYVAGQI SDLAEKLEQA ESQLANSRYG GIAPAGHQRR 300
  301 KEDEPQLAKI TRDSAKITVE QVHGLMSQVI KDILFNSARQ SKKSADDSSD PEPMITS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..56] MSA 1.162994 View MSA. No confident structure predictions are available.
    2 View Details [57..228] PSI-BLAST 32.69897 No description for 2o95A was found.
    3 View Details [229..357] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle