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Protein Overview: ELCL_ARATH

General Information:
Name(s) found: ELCL_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Protein ELC-like OS=Arabidopsis thaliana GN=ELCL PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: ESCRT I complex [ISS]
    Biological Process: regulation of protein metabolic process [IEA]
    protein transport [IEA]
    protein modification process [IEA]
    post-translational protein modification [IEA]
    Molecular Function: small conjugating protein ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPPAKMQE IHQFLSSALT QRGPSALPYA ENTKSLIRQH LLNLISSYTS LDPKTATFTH  60
   61 NDGRSVILLQ ADGTIPMPFQ GVSYNIPVVI WLLESYPQYP PCVYVNPTRD MIIKRPHSNV 120
  121 SPSGLVSLPY LQNWIYPSSN LVDLASHLSA AFSRDPPLYS QRRPPPQPSP SIGSGYSRPL 180
  181 PPRQTDDAAE VYKKNAINRI VEMVHGDIVL MRSAREVETE GLLSLQSDLK RREEEINNGF 240
  241 KEMVIEKETL EQQLQVIAMN TDVLGSWIRE NQGKAKDLLV DLDVDDSFEC IDSLSKQMLE 300
  301 CTALDLAIED VVYSMDKSFR DGSLPFDQYL RNVRLLSREQ FFHRATAEKV REIQMDAQVA 360
  361 SIAARLHS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] PSI-BLAST 38.09691 No description for 2f0rA was found.
    2 View Details [117..368] PSI-BLAST 20.09691 Heavy meromyosin subfragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.36134415541475 bayes_pls_golite062009
  • ligase activity
    		•  0.0718869348666398 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.0371971638467299 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.0334819228148397 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  0.0318206634586797 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle