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Protein Overview: gi|12323388, gi|...

General Information:
Name(s) found: gi|25315625 [NCBI NR]
gi|15217440 [NCBI NR]
gi|12323388 [NCBI NR]
gi|114050631 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • pir||D96806 probable aminotransferase, 101422-99564 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15217440|ref|NP_177890.1| aminotransferase class I and II family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12323388|gb|AAG51669.1|AC010704_13 putative aminotransferase; 101422-99564 [Arabidopsis thaliana] [NCBI NR]
  • gi|114050631|gb|ABI49465.1| At1g77670 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biosynthetic process [IEA]
    Molecular Function: pyridoxal phosphate binding [IEA]
    transferase activity, transferring nitrogenous groups [IEA]
    1-aminocyclopropane-1-carboxylate synthase activity [IEA]
    catalytic activity [IEA]
    transaminase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLDINGVMI KQFSFKASLL PFSSNFRQSS AKIHRPIGAT MTTVSTQNES TQKPVQVAKR  60
   61 LEKFKTTIFT QMSILAVKHG AINLGQGFPN FDGPDFVKEA AIQAIKDGKN QYARGYGIPQ 120
  121 LNSAIAARFR EDTGLVVDPE KEVTVTSGCT EAIAAAMLGL INPGDEVILF APFYDSYEAT 180
  181 LSMAGAKVKG ITLRPPDFSI PLEELKAAVT NKTRAILMNT PHNPTGKMFT REELETIASL 240
  241 CIENDVLVFS DEVYDKLAFE MDHISIASLP GMYERTVTMN SLGKTFSLTG WKIGWAIAPP 300
  301 HLTWGVRQAH SYLTFATSTP AQWAAVAALK APESYFKELK RDYNVKKETL VKGLKEVGFT 360
  361 VFPSSGTYFV VADHTPFGME NDVAFCEYLI EEVGVVAIPT SVFYLNPEEG KNLVRFAFCK 420
  421 DEETLRGAIE RMKQKLKRKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..440] PSI-BLAST 84.69897 Crystal Structure and Reactivity of YbdL from Escherichia coli Identify a Methionine Aminotransferase Function.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  5.51961002550688 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • 4-aminobutyrate transaminase activity
    		•  1.82501790383768 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.63055151623667 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.63055151623667 bayes_pls_golite062009
  • transferase activity
    		•  1.44093490824786 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
    		•  0.942545094747784 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds
    		•  0.845816961387768 bayes_pls_golite062009
  • 5-aminolevulinate synthase activity
    		•  0.54326874956263 bayes_pls_golite062009
  • binding
    		•  0.536634592992536 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.319452731970428 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • aromatic-amino-acid:2-oxoglutarate aminotransferase activity
    		•  0.0916183433120769 bayes_pls_golite062009
  • kynureninase activity
    		•  0.0900983660305177 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.0833010353195099 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.013097682076602 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle