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Protein Overview: LRX3_ARATH

General Information:
Name(s) found: LRX3_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T06291 extensin homolog T9E8.80 - Arabidopsis thaliana [NCBI NR]
  • gi|7268037|emb|CAB78376.1| extensin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4584539|emb|CAB40769.1| extensin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15235668|ref|NP_193070.1| leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] [NCBI NR]
  • Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=LRX3 PE=1 SV=1 [Swiss-Prot]
  • (Q9T0K5) Extensin-like protein [athaliana3702.FASTAC.txt]
  • extensin-like protein [Arabidopsis thaliana]gi|7268037|emb|CAB78376.1| extensin-like protein [Arabidopsis thaliana]gi|7484961|pir||T06291 extensin homolog T9E8.80 - Arabidopsis thalianagi|15235668|ref|NP_193070.1| leucine-rich repeat family protein / e [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Leucine-rich repeat family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | leucine-rich repeat family protein / extensin family protein | chr4:7758606-7760888 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • extensin-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Leucine-rich repeat (LRR) family protein | chr4:7758610-7760892 FORWARD LENGTH=760 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 760 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    plant-type cell wall [IDA]
    Biological Process: NONE FOUND
    Molecular Function: protein binding [ISS]
    structural constituent of cell wall [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTIQILLF FFFLINLTNA LSISSDGGVL SDNEVRHIQR RQLLEFAERS VKITVDPSLN  60
   61 FENPRLRNAY IALQAWKQAI LSDPNNFTSN WIGSNVCNYT GVFCSPALDN RKIRTVAGID 120
  121 LNHADIAGYL PEELGLLSDL ALFHVNSNRF CGTVPHRFNR LKLLFELDLS NNRFAGKFPT 180
  181 VVLQLPSLKF LDLRFNEFEG TVPKELFSKD LDAIFINHNR FRFELPENFG DSPVSVIVLA 240
  241 NNRFHGCVPS SLVEMKNLNE IIFMNNGLNS CLPSDIGRLK NVTVFDVSFN ELVGPLPESV 300
  301 GEMVSVEQLN VAHNMLSGKI PASICQLPKL ENFTYSYNFF TGEAPVCLRL PEFDDRRNCL 360
  361 PGRPAQRSPG QCKAFLSRPP VNCGSFSCGR SVSPRPPVVT PLPPPSLPSP PPPAPIFSTP 420
  421 PTLTSPPPPS PPPPVYSPPP PPPPPPPVYS PPPPPPPPPP PPVYSPPPPP PPPPPPPPVY 480
  481 SPPPPSPPPP PPPVYSPPPP PPPPPPPPVY SPPPPPVYSS PPPPPSPAPT PVYCTRPPPP 540
  541 PPHSPPPPQF SPPPPEPYYY SSPPPPHSSP PPHSPPPPHS PPPPIYPYLS PPPPPTPVSS 600
  601 PPPTPVYSPP PPPPCIEPPP PPPCIEYSPP PPPPVVHYSS PPPPPVYYSS PPPPPVYYSS 660
  661 PPPPPPVHYS SPPPPEVHYH SPPPSPVHYS SPPPPPSAPC EESPPPAPVV HHSPPPPMVH 720
  721 HSPPPPVIHQ SPPPPSPEYE GPLPPVIGVS YASPPPPPFY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..463] PSI-BLAST 39.30103 The molecular structure of toll-like receptor 3 ligand binding domain
    2 View Details [464..650] FFAS03 0.995 No description for 2j63A was found.
    3 View Details [651..760] MSA 2.103992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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