| Protein: | LRX3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 760 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LRX3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
412.0 | [0..2] | [466..106] |
|
Region A: Residues: [1-463] |
1 11 21 31 41 51
| | | | | |
1 MKKTIQILLF FFFLINLTNA LSISSDGGVL SDNEVRHIQR RQLLEFAERS VKITVDPSLN 60
61 FENPRLRNAY IALQAWKQAI LSDPNNFTSN WIGSNVCNYT GVFCSPALDN RKIRTVAGID 120
121 LNHADIAGYL PEELGLLSDL ALFHVNSNRF CGTVPHRFNR LKLLFELDLS NNRFAGKFPT 180
181 VVLQLPSLKF LDLRFNEFEG TVPKELFSKD LDAIFINHNR FRFELPENFG DSPVSVIVLA 240
241 NNRFHGCVPS SLVEMKNLNE IIFMNNGLNS CLPSDIGRLK NVTVFDVSFN ELVGPLPESV 300
301 GEMVSVEQLN VAHNMLSGKI PASICQLPKL ENFTYSYNFF TGEAPVCLRL PEFDDRRNCL 360
361 PGRPAQRSPG QCKAFLSRPP VNCGSFSCGR SVSPRPPVVT PLPPPSLPSP PPPAPIFSTP 420
421 PTLTSPPPPS PPPPVYSPPP PPPPPPPVYS PPPPPPPPPP PPV
|
| Detection Method: |  |
| Confidence: | 39.30103 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [464-650] |
1 11 21 31 41 51
| | | | | |
1 YSPPPPPPPP PPPPPVYSPP PPSPPPPPPP VYSPPPPPPP PPPPPVYSPP PPPVYSSPPP 60
61 PPSPAPTPVY CTRPPPPPPH SPPPPQFSPP PPEPYYYSSP PPPHSSPPPH SPPPPHSPPP 120
121 PIYPYLSPPP PPTPVSSPPP TPVYSPPPPP PCIEPPPPPP CIEYSPPPPP PVVHYSSPPP 180
181 PPVYYSS
|
| Detection Method: | |
| Confidence: | 0.995 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [651-760] |
1 11 21 31 41 51
| | | | | |
1 PPPPPVYYSS PPPPPPVHYS SPPPPEVHYH SPPPSPVHYS SPPPPPSAPC EESPPPAPVV 60
61 HHSPPPPMVH HSPPPPVIHQ SPPPPSPEYE GPLPPVIGVS YASPPPPPFY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
