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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRX3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTIQILLF FFFLINLTNA LSISSDGGVL SDNEVRHIQR RQLLEFAERS VKITVDPSLN  60
   61 FENPRLRNAY IALQAWKQAI LSDPNNFTSN WIGSNVCNYT GVFCSPALDN RKIRTVAGID 120
  121 LNHADIAGYL PEELGLLSDL ALFHVNSNRF CGTVPHRFNR LKLLFELDLS NNRFAGKFPT 180
  181 VVLQLPSLKF LDLRFNEFEG TVPKELFSKD LDAIFINHNR FRFELPENFG DSPVSVIVLA 240
  241 NNRFHGCVPS SLVEMKNLNE IIFMNNGLNS CLPSDIGRLK NVTVFDVSFN ELVGPLPESV 300
  301 GEMVSVEQLN VAHNMLSGKI PASICQLPKL ENFTYSYNFF TGEAPVCLRL PEFDDRRNCL 360
  361 PGRPAQRSPG QCKAFLSRPP VNCGSFSCGR SVSPRPPVVT PLPPPSLPSP PPPAPIFSTP 420
  421 PTLTSPPPPS PPPPVYSPPP PPPPPPPVYS PPPPPPPPPP PPVYSPPPPP PPPPPPPPVY 480
  481 SPPPPSPPPP PPPVYSPPPP PPPPPPPPVY SPPPPPVYSS PPPPPSPAPT PVYCTRPPPP 540
  541 PPHSPPPPQF SPPPPEPYYY SSPPPPHSSP PPHSPPPPHS PPPPIYPYLS PPPPPTPVSS 600
  601 PPPTPVYSPP PPPPCIEPPP PPPCIEYSPP PPPPVVHYSS PPPPPVYYSS PPPPPVYYSS 660
  661 PPPPPPVHYS SPPPPEVHYH SPPPSPVHYS SPPPPPSAPC EESPPPAPVV HHSPPPPMVH 720
  721 HSPPPPVIHQ SPPPPSPEYE GPLPPVIGVS YASPPPPPFY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle