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Protein Overview: PEL1_ARATH

General Information:
Name(s) found: PEL1_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Protein PELOTA 1 OS=Arabidopsis thaliana GN=PEL1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 378 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: translational termination [ISS]
    meiosis [ISS]
    translation [IEA]
    Molecular Function: translation release factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIVRRDFVR NGPGSVKMVA EDSDDLWYAY NLIAVGDSVM AVTFRKVQRE IPGGGRDSER  60
   61 VKLKLEVQVE EVDYDKDGSV LRIRGKNILE NEHVKIGAFH TLELELKRPF VLRKEMWDSM 120
  121 ALDTLKQASD PAASADLAVV LMQEGLAQIF LVGRSVTSSR ARIETSIPRK HGPAIAGYES 180
  181 ALKKFFENVL QAFVKHVDFS VVRCAVVASP GFTKDQFHRH LLLEAERRQL RPIIENKSRI 240
  241 ILVHTNSGYR HSLGEVLHAP NVMNMIKDTK AAKEVKALND FHNMLSTEPD RACYGPKHVE 300
  301 VANERMAIQT LLITDELFRN SDVKTRKKYV NLVESVKDSG GDAFIFSAMH VSGEQLAQLT 360
  361 GIAALLRFPL PELEDIEM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..378] PSI-BLAST 116.0 Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • RNA binding
    		•  3.8176240743328 bayes_pls_golite062009
  • translation release factor activity
    		•  3.48975835887408 bayes_pls_golite062009
  • translation termination factor activity
    		•  3.46050614877315 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  2.50763528378297 bayes_pls_golite062009
  • binding
    		•  2.24516466558786 bayes_pls_golite062009
  • structural molecule activity
    		•  2.17996532926344 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.09371417164502 bayes_pls_golite062009
  • translation regulator activity
    		•  1.83257472130927 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  1.81472167858216 bayes_pls_golite062009
  • mRNA binding
    		•  1.38466459724533 bayes_pls_golite062009
    		• 1.36644447800624 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.519765773143644 bayes_pls_golite062009
  • protein binding
    		•  0.381324299701367 bayes_pls_golite062009
  • hydrolase activity
    		•  0.341035995293011 bayes_pls_golite062009
  • catalytic activity
    		•  0.264002643439785 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle