| Protein: | PEL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 378 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEL1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
437.0 | [0..1] | [377..1] |
|
Region A: Residues: [1-378] |
1 11 21 31 41 51
| | | | | |
1 MKIVRRDFVR NGPGSVKMVA EDSDDLWYAY NLIAVGDSVM AVTFRKVQRE IPGGGRDSER 60
61 VKLKLEVQVE EVDYDKDGSV LRIRGKNILE NEHVKIGAFH TLELELKRPF VLRKEMWDSM 120
121 ALDTLKQASD PAASADLAVV LMQEGLAQIF LVGRSVTSSR ARIETSIPRK HGPAIAGYES 180
181 ALKKFFENVL QAFVKHVDFS VVRCAVVASP GFTKDQFHRH LLLEAERRQL RPIIENKSRI 240
241 ILVHTNSGYR HSLGEVLHAP NVMNMIKDTK AAKEVKALND FHNMLSTEPD RACYGPKHVE 300
301 VANERMAIQT LLITDELFRN SDVKTRKKYV NLVESVKDSG GDAFIFSAMH VSGEQLAQLT 360
361 GIAALLRFPL PELEDIEM
|
| Detection Method: |  |
| Confidence: | 116.0 |
| Match: | 1dt9A |
| Description: | Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 3.8176240743328 | bayes_pls_golite062009 |
| translation release factor activity | 3.48975835887408 | bayes_pls_golite062009 |
| translation termination factor activity | 3.46050614877315 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.50763528378297 | bayes_pls_golite062009 |
| binding | 2.24516466558786 | bayes_pls_golite062009 |
| structural molecule activity | 2.17996532926344 | bayes_pls_golite062009 |
| nucleic acid binding | 2.09371417164502 | bayes_pls_golite062009 |
| translation regulator activity | 1.83257472130927 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.81472167858216 | bayes_pls_golite062009 |
| mRNA binding | 1.38466459724533 | bayes_pls_golite062009 |
| 1.36644447800624 | bayes_pls_golite062009 | |
| ribonuclease activity | 0.519765773143644 | bayes_pls_golite062009 |
| protein binding | 0.381324299701367 | bayes_pls_golite062009 |
| hydrolase activity | 0.341035995293011 | bayes_pls_golite062009 |
| catalytic activity | 0.264002643439785 | bayes_pls_golite062009 |
