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Protein Overview: gi|12323288, gi|...

General Information:
Name(s) found: gi|25316420 [NCBI NR]
gi|15218106 [NCBI NR]
gi|12323288 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • pir||G96807 probable endo-1,3-beta-glucanase, 56885-55794 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15218106|ref|NP_177901.1| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12323288|gb|AAG51620.1|AC012193_2 putative endo-1,3-beta-glucanase; 56885-55794 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: anchored to membrane [TAS]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLIATLLFL SARLTTAGNM NSFAGVCYGR NGDNLPSPAK TVSLYKKINV GGIRLYEPFP  60
   61 DLIVSLQGTG LLVAIGPRNE AIKTLAEEYQ FALNWDKTFI APYKNVAFNW ITVGNEVIEG 120
  121 EIGRYVPQAM KNIKAALTEI GNSKIHVTTV ISTAALANSY PPSAGVFKPA ITELITEIVS 180
  181 ILSSTDSPLM VNVYPYFAYA SDPSHVSLEY ATFRSTSPVV TDGKYQYTNI FDATLDAFNV 240
  241 ALEKINHGSV KVYVAETGWP TRGNDPYTSV ENARAYNQGL LKKLTTGKGT PRRPNVPVIT 300
  301 FFFEMFNEDL KQGAVEQSFG FFDPNMAPVY DMWNIARTSN ASPSWVIWTN WVIWTMLITR 360
  361 LFY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] PSI-BLAST 101.0 Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle